Gene : Carub.0007s0728 C. rubella v1.1
Defline:  (1 of 56) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  728
Name:  ? Carub.0007s0728 Secondary Identifier:  ? PAC:39233932
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0728 0.5kb upstream 0.5kb upstream 3491 true scaffold_7: 2699586-2703076 Capsella rubella
Carub.0007s0728 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 2699586-2700085 Capsella rubella
Carub.0007s0728 0.5kb downstream 0.5kb downstream 3491 true scaffold_7: 2700086-2703576 Capsella rubella
Carub.0007s0728 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 2703077-2703576 Capsella rubella
Carub.0007s0728 1.0kb upstream 1.0kb upstream 3991 true scaffold_7: 2699086-2703076 Capsella rubella
Carub.0007s0728 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 2699086-2700085 Capsella rubella
Carub.0007s0728 1.0kb downstream 1.0kb downstream 3991 true scaffold_7: 2700086-2704076 Capsella rubella
Carub.0007s0728 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 2703077-2704076 Capsella rubella
Carub.0007s0728 2.0kb upstream 2.0kb upstream 4991 true scaffold_7: 2698086-2703076 Capsella rubella
Carub.0007s0728 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 2698086-2700085 Capsella rubella
Carub.0007s0728 2.0kb downstream 2.0kb downstream 4991 true scaffold_7: 2700086-2705076 Capsella rubella
Carub.0007s0728 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 2703077-2705076 Capsella rubella
Carub.0007s0728 5.0kb upstream 5.0kb upstream 7991 true scaffold_7: 2695086-2703076 Capsella rubella
Carub.0007s0728 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 2695086-2700085 Capsella rubella
Carub.0007s0728 5.0kb downstream 5.0kb downstream 7991 true scaffold_7: 2700086-2708076 Capsella rubella
Carub.0007s0728 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 2703077-2708076 Capsella rubella
Carub.0007s0728 10.0kb upstream 10.0kb upstream 12991 true scaffold_7: 2690086-2703076 Capsella rubella
Carub.0007s0728 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 2690086-2700085 Capsella rubella
Carub.0007s0728 10.0kb downstream 10.0kb downstream 12991 true scaffold_7: 2700086-2713076 Capsella rubella
Carub.0007s0728 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 2703077-2713076 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373860 5261 Brassicaceae View MSA
123837711 5264 Brassicales-Malvales View MSA
124349519 5266 SBM View MSA
124246468 5268 Malvidae View MSA
124070333 5270 Rosid View MSA
123744746 5271 Pentapetalae View MSA
122794994 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain