Gene : Carub.0007s0149 C. rubella v1.1
Defline:  (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  149
Name:  ? Carub.0007s0149 Secondary Identifier:  ? PAC:39235786
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0149 0.5kb upstream 0.5kb upstream 2941 true scaffold_7: 542603-545543 Capsella rubella
Carub.0007s0149 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 542603-543102 Capsella rubella
Carub.0007s0149 0.5kb downstream 0.5kb downstream 2941 true scaffold_7: 543103-546043 Capsella rubella
Carub.0007s0149 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 545544-546043 Capsella rubella
Carub.0007s0149 1.0kb upstream 1.0kb upstream 3441 true scaffold_7: 542103-545543 Capsella rubella
Carub.0007s0149 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 542103-543102 Capsella rubella
Carub.0007s0149 1.0kb downstream 1.0kb downstream 3441 true scaffold_7: 543103-546543 Capsella rubella
Carub.0007s0149 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 545544-546543 Capsella rubella
Carub.0007s0149 2.0kb upstream 2.0kb upstream 4441 true scaffold_7: 541103-545543 Capsella rubella
Carub.0007s0149 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 541103-543102 Capsella rubella
Carub.0007s0149 2.0kb downstream 2.0kb downstream 4441 true scaffold_7: 543103-547543 Capsella rubella
Carub.0007s0149 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 545544-547543 Capsella rubella
Carub.0007s0149 5.0kb upstream 5.0kb upstream 7441 true scaffold_7: 538103-545543 Capsella rubella
Carub.0007s0149 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 538103-543102 Capsella rubella
Carub.0007s0149 5.0kb downstream 5.0kb downstream 7441 true scaffold_7: 543103-550543 Capsella rubella
Carub.0007s0149 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 545544-550543 Capsella rubella
Carub.0007s0149 10.0kb upstream 10.0kb upstream 12441 true scaffold_7: 533103-545543 Capsella rubella
Carub.0007s0149 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 533103-543102 Capsella rubella
Carub.0007s0149 10.0kb downstream 10.0kb downstream 12441 true scaffold_7: 543103-555543 Capsella rubella
Carub.0007s0149 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 545544-555543 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364166 5261 Brassicaceae View MSA
123830120 5264 Brassicales-Malvales View MSA
124340228 5266 SBM View MSA
124239716 5268 Malvidae View MSA
124065568 5270 Rosid View MSA
123738247 5271 Pentapetalae View MSA
122787727 5272 Eudicot View MSA
122046290 5273 Angiosperm View MSA
121345474 5274 Embryophyte View MSA
123380225 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain