Gene : Carub.0007s0358 C. rubella v1.1
Defline:  (1 of 3) PTHR24326:SF281 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-21-RELATED Genomic Order:  358
Name:  ? Carub.0007s0358 Secondary Identifier:  ? PAC:39232082
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0358 0.5kb upstream 0.5kb upstream 2195 true scaffold_7: 1324538-1326732 Capsella rubella
Carub.0007s0358 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1324538-1325037 Capsella rubella
Carub.0007s0358 0.5kb downstream 0.5kb downstream 2195 true scaffold_7: 1325038-1327232 Capsella rubella
Carub.0007s0358 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1326733-1327232 Capsella rubella
Carub.0007s0358 1.0kb upstream 1.0kb upstream 2695 true scaffold_7: 1324038-1326732 Capsella rubella
Carub.0007s0358 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1324038-1325037 Capsella rubella
Carub.0007s0358 1.0kb downstream 1.0kb downstream 2695 true scaffold_7: 1325038-1327732 Capsella rubella
Carub.0007s0358 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1326733-1327732 Capsella rubella
Carub.0007s0358 2.0kb upstream 2.0kb upstream 3695 true scaffold_7: 1323038-1326732 Capsella rubella
Carub.0007s0358 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1323038-1325037 Capsella rubella
Carub.0007s0358 2.0kb downstream 2.0kb downstream 3695 true scaffold_7: 1325038-1328732 Capsella rubella
Carub.0007s0358 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1326733-1328732 Capsella rubella
Carub.0007s0358 5.0kb upstream 5.0kb upstream 6695 true scaffold_7: 1320038-1326732 Capsella rubella
Carub.0007s0358 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1320038-1325037 Capsella rubella
Carub.0007s0358 5.0kb downstream 5.0kb downstream 6695 true scaffold_7: 1325038-1331732 Capsella rubella
Carub.0007s0358 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1326733-1331732 Capsella rubella
Carub.0007s0358 10.0kb upstream 10.0kb upstream 11695 true scaffold_7: 1315038-1326732 Capsella rubella
Carub.0007s0358 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1315038-1325037 Capsella rubella
Carub.0007s0358 10.0kb downstream 10.0kb downstream 11695 true scaffold_7: 1325038-1336732 Capsella rubella
Carub.0007s0358 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1326733-1336732 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368682 5261 Brassicaceae View MSA
123836395 5264 Brassicales-Malvales View MSA
124345249 5266 SBM View MSA
124253261 5268 Malvidae View MSA
124061300 5270 Rosid View MSA
123736680 5271 Pentapetalae View MSA
122796133 5272 Eudicot View MSA
122042679 5273 Angiosperm View MSA
121309999 5274 Embryophyte View MSA
123347608 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain