Gene : Carub.0007s0218 C. rubella v1.1
Defline:  (1 of 1) PTHR11062//PTHR11062:SF63 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // EXOSTOSIN FAMILY PROTEIN Genomic Order:  218
Name:  ? Carub.0007s0218 Secondary Identifier:  ? PAC:39233002
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5980 Capsella rubella pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0218 0.5kb upstream 0.5kb upstream 2644 true scaffold_7: 756487-759130 Capsella rubella
Carub.0007s0218 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 758631-759130 Capsella rubella
Carub.0007s0218 0.5kb downstream 0.5kb downstream 2644 true scaffold_7: 755987-758630 Capsella rubella
Carub.0007s0218 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 755987-756486 Capsella rubella
Carub.0007s0218 1.0kb upstream 1.0kb upstream 3144 true scaffold_7: 756487-759630 Capsella rubella
Carub.0007s0218 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 758631-759630 Capsella rubella
Carub.0007s0218 1.0kb downstream 1.0kb downstream 3144 true scaffold_7: 755487-758630 Capsella rubella
Carub.0007s0218 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 755487-756486 Capsella rubella
Carub.0007s0218 2.0kb upstream 2.0kb upstream 4144 true scaffold_7: 756487-760630 Capsella rubella
Carub.0007s0218 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 758631-760630 Capsella rubella
Carub.0007s0218 2.0kb downstream 2.0kb downstream 4144 true scaffold_7: 754487-758630 Capsella rubella
Carub.0007s0218 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 754487-756486 Capsella rubella
Carub.0007s0218 5.0kb upstream 5.0kb upstream 7144 true scaffold_7: 756487-763630 Capsella rubella
Carub.0007s0218 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 758631-763630 Capsella rubella
Carub.0007s0218 5.0kb downstream 5.0kb downstream 7144 true scaffold_7: 751487-758630 Capsella rubella
Carub.0007s0218 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 751487-756486 Capsella rubella
Carub.0007s0218 10.0kb upstream 10.0kb upstream 12144 true scaffold_7: 756487-768630 Capsella rubella
Carub.0007s0218 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 758631-768630 Capsella rubella
Carub.0007s0218 10.0kb downstream 10.0kb downstream 12144 true scaffold_7: 746487-758630 Capsella rubella
Carub.0007s0218 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 746487-756486 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369727 5261 Brassicaceae View MSA
123834330 5264 Brassicales-Malvales View MSA
124350181 5266 SBM View MSA
124254213 5268 Malvidae View MSA
124072198 5270 Rosid View MSA
123751032 5271 Pentapetalae View MSA
122797278 5272 Eudicot View MSA
122050562 5273 Angiosperm View MSA
121350610 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain