Gene : Carub.0007s0260 C. rubella v1.1
Defline:  (1 of 2) K14682 - amino-acid N-acetyltransferase (argAB) Genomic Order:  260
Name:  ? Carub.0007s0260 Secondary Identifier:  ? PAC:39233734
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella ARGSYNBSUB-PWY Capsella rubella pathologic  
Crubella ARGSYN-PWY Capsella rubella pathologic  
Crubella GLUTORN-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0260 0.5kb upstream 0.5kb upstream 3484 true scaffold_7: 924733-928216 Capsella rubella
Carub.0007s0260 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 924733-925232 Capsella rubella
Carub.0007s0260 0.5kb downstream 0.5kb downstream 3484 true scaffold_7: 925233-928716 Capsella rubella
Carub.0007s0260 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 928217-928716 Capsella rubella
Carub.0007s0260 1.0kb upstream 1.0kb upstream 3984 true scaffold_7: 924233-928216 Capsella rubella
Carub.0007s0260 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 924233-925232 Capsella rubella
Carub.0007s0260 1.0kb downstream 1.0kb downstream 3984 true scaffold_7: 925233-929216 Capsella rubella
Carub.0007s0260 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 928217-929216 Capsella rubella
Carub.0007s0260 2.0kb upstream 2.0kb upstream 4984 true scaffold_7: 923233-928216 Capsella rubella
Carub.0007s0260 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 923233-925232 Capsella rubella
Carub.0007s0260 2.0kb downstream 2.0kb downstream 4984 true scaffold_7: 925233-930216 Capsella rubella
Carub.0007s0260 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 928217-930216 Capsella rubella
Carub.0007s0260 5.0kb upstream 5.0kb upstream 7984 true scaffold_7: 920233-928216 Capsella rubella
Carub.0007s0260 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 920233-925232 Capsella rubella
Carub.0007s0260 5.0kb downstream 5.0kb downstream 7984 true scaffold_7: 925233-933216 Capsella rubella
Carub.0007s0260 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 928217-933216 Capsella rubella
Carub.0007s0260 10.0kb upstream 10.0kb upstream 12984 true scaffold_7: 915233-928216 Capsella rubella
Carub.0007s0260 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 915233-925232 Capsella rubella
Carub.0007s0260 10.0kb downstream 10.0kb downstream 12984 true scaffold_7: 925233-938216 Capsella rubella
Carub.0007s0260 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 928217-938216 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370660 5261 Brassicaceae View MSA
123838224 5264 Brassicales-Malvales View MSA
124337705 5266 SBM View MSA
124237998 5268 Malvidae View MSA
124071227 5270 Rosid View MSA
123741250 5271 Pentapetalae View MSA
122788780 5272 Eudicot View MSA
122042495 5273 Angiosperm View MSA
121347122 5274 Embryophyte View MSA
123426582 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain