Gene : Carub.0006s3531 C. rubella v1.1
Defline:  (1 of 1) PTHR30115:SF11 - NITROGEN REGULATORY PROTEIN P-II HOMOLOG Genomic Order:  3531
Name:  ? Carub.0006s3531 Secondary Identifier:  ? PAC:39249334
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3531 0.5kb upstream 0.5kb upstream 2330 true scaffold_6: 15867050-15869379 Capsella rubella
Carub.0006s3531 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 15868880-15869379 Capsella rubella
Carub.0006s3531 0.5kb downstream 0.5kb downstream 2330 true scaffold_6: 15866550-15868879 Capsella rubella
Carub.0006s3531 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 15866550-15867049 Capsella rubella
Carub.0006s3531 1.0kb upstream 1.0kb upstream 2830 true scaffold_6: 15867050-15869879 Capsella rubella
Carub.0006s3531 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 15868880-15869879 Capsella rubella
Carub.0006s3531 1.0kb downstream 1.0kb downstream 2830 true scaffold_6: 15866050-15868879 Capsella rubella
Carub.0006s3531 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 15866050-15867049 Capsella rubella
Carub.0006s3531 2.0kb upstream 2.0kb upstream 3830 true scaffold_6: 15867050-15870879 Capsella rubella
Carub.0006s3531 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 15868880-15870879 Capsella rubella
Carub.0006s3531 2.0kb downstream 2.0kb downstream 3830 true scaffold_6: 15865050-15868879 Capsella rubella
Carub.0006s3531 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 15865050-15867049 Capsella rubella
Carub.0006s3531 5.0kb upstream 5.0kb upstream 6830 true scaffold_6: 15867050-15873879 Capsella rubella
Carub.0006s3531 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 15868880-15873879 Capsella rubella
Carub.0006s3531 5.0kb downstream 5.0kb downstream 6830 true scaffold_6: 15862050-15868879 Capsella rubella
Carub.0006s3531 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 15862050-15867049 Capsella rubella
Carub.0006s3531 10.0kb upstream 10.0kb upstream 11830 true scaffold_6: 15867050-15878879 Capsella rubella
Carub.0006s3531 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 15868880-15878879 Capsella rubella
Carub.0006s3531 10.0kb downstream 10.0kb downstream 11830 true scaffold_6: 15857050-15868879 Capsella rubella
Carub.0006s3531 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 15857050-15867049 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373564 5261 Brassicaceae View MSA
123831385 5264 Brassicales-Malvales View MSA
124339745 5266 SBM View MSA
124240328 5268 Malvidae View MSA
124069183 5270 Rosid View MSA
123739207 5271 Pentapetalae View MSA
122791239 5272 Eudicot View MSA
122047229 5273 Angiosperm View MSA
121345454 5274 Embryophyte View MSA
123425159 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain