Gene : Carub.0006s3544 C. rubella v1.1
Defline:  (1 of 77) PTHR32410//PTHR32410:SF152 - FAMILY NOT NAMED // C1 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  3544
Name:  ? Carub.0006s3544 Secondary Identifier:  ? PAC:39248160
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3544 0.5kb upstream 0.5kb upstream 2473 true scaffold_6: 15916250-15918722 Capsella rubella
Carub.0006s3544 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 15918223-15918722 Capsella rubella
Carub.0006s3544 0.5kb downstream 0.5kb downstream 2473 true scaffold_6: 15915750-15918222 Capsella rubella
Carub.0006s3544 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 15915750-15916249 Capsella rubella
Carub.0006s3544 1.0kb upstream 1.0kb upstream 2973 true scaffold_6: 15916250-15919222 Capsella rubella
Carub.0006s3544 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 15918223-15919222 Capsella rubella
Carub.0006s3544 1.0kb downstream 1.0kb downstream 2973 true scaffold_6: 15915250-15918222 Capsella rubella
Carub.0006s3544 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 15915250-15916249 Capsella rubella
Carub.0006s3544 2.0kb upstream 2.0kb upstream 3973 true scaffold_6: 15916250-15920222 Capsella rubella
Carub.0006s3544 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 15918223-15920222 Capsella rubella
Carub.0006s3544 2.0kb downstream 2.0kb downstream 3973 true scaffold_6: 15914250-15918222 Capsella rubella
Carub.0006s3544 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 15914250-15916249 Capsella rubella
Carub.0006s3544 5.0kb upstream 5.0kb upstream 6973 true scaffold_6: 15916250-15923222 Capsella rubella
Carub.0006s3544 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 15918223-15923222 Capsella rubella
Carub.0006s3544 5.0kb downstream 5.0kb downstream 6973 true scaffold_6: 15911250-15918222 Capsella rubella
Carub.0006s3544 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 15911250-15916249 Capsella rubella
Carub.0006s3544 10.0kb upstream 10.0kb upstream 11973 true scaffold_6: 15916250-15928222 Capsella rubella
Carub.0006s3544 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 15918223-15928222 Capsella rubella
Carub.0006s3544 10.0kb downstream 10.0kb downstream 11973 true scaffold_6: 15906250-15918222 Capsella rubella
Carub.0006s3544 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 15906250-15916249 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378889 5261 Brassicaceae View MSA
123841170 5264 Brassicales-Malvales View MSA
124322862 5266 SBM View MSA
124254358 5268 Malvidae View MSA
124070692 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain