Gene : Carub.0006s3564 C. rubella v1.1
Defline:  (1 of 1) KOG2780 - Ribosome biogenesis protein RPF1, contains IMP4 domain Genomic Order:  3564
Name:  ? Carub.0006s3564 Secondary Identifier:  ? PAC:39246654
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3564 0.5kb upstream 0.5kb upstream 2617 true scaffold_6: 15997503-16000119 Capsella rubella
Carub.0006s3564 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 15997503-15998002 Capsella rubella
Carub.0006s3564 0.5kb downstream 0.5kb downstream 2617 true scaffold_6: 15998003-16000619 Capsella rubella
Carub.0006s3564 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 16000120-16000619 Capsella rubella
Carub.0006s3564 1.0kb upstream 1.0kb upstream 3117 true scaffold_6: 15997003-16000119 Capsella rubella
Carub.0006s3564 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 15997003-15998002 Capsella rubella
Carub.0006s3564 1.0kb downstream 1.0kb downstream 3117 true scaffold_6: 15998003-16001119 Capsella rubella
Carub.0006s3564 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 16000120-16001119 Capsella rubella
Carub.0006s3564 2.0kb upstream 2.0kb upstream 4117 true scaffold_6: 15996003-16000119 Capsella rubella
Carub.0006s3564 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 15996003-15998002 Capsella rubella
Carub.0006s3564 2.0kb downstream 2.0kb downstream 4117 true scaffold_6: 15998003-16002119 Capsella rubella
Carub.0006s3564 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 16000120-16002119 Capsella rubella
Carub.0006s3564 5.0kb upstream 5.0kb upstream 7117 true scaffold_6: 15993003-16000119 Capsella rubella
Carub.0006s3564 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 15993003-15998002 Capsella rubella
Carub.0006s3564 5.0kb downstream 5.0kb downstream 7117 true scaffold_6: 15998003-16005119 Capsella rubella
Carub.0006s3564 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 16000120-16005119 Capsella rubella
Carub.0006s3564 10.0kb upstream 10.0kb upstream 12117 true scaffold_6: 15988003-16000119 Capsella rubella
Carub.0006s3564 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 15988003-15998002 Capsella rubella
Carub.0006s3564 10.0kb downstream 10.0kb downstream 12117 true scaffold_6: 15998003-16010119 Capsella rubella
Carub.0006s3564 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 16000120-16010119 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362507 5261 Brassicaceae View MSA
123833516 5264 Brassicales-Malvales View MSA
124336710 5266 SBM View MSA
124238682 5268 Malvidae View MSA
124063799 5270 Rosid View MSA
123738060 5271 Pentapetalae View MSA
122790896 5272 Eudicot View MSA
122041933 5273 Angiosperm View MSA
121347533 5274 Embryophyte View MSA
123426591 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain