Gene : Carub.0007s0004 C. rubella v1.1
Defline:  (1 of 414) PF13041 - PPR repeat family (PPR_2) Genomic Order:  4
Name:  ? Carub.0007s0004 Secondary Identifier:  ? PAC:39233874
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0004 0.5kb upstream 0.5kb upstream 2222 true scaffold_7: 14519-16740 Capsella rubella
Carub.0007s0004 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 16241-16740 Capsella rubella
Carub.0007s0004 0.5kb downstream 0.5kb downstream 2222 true scaffold_7: 14019-16240 Capsella rubella
Carub.0007s0004 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 14019-14518 Capsella rubella
Carub.0007s0004 1.0kb upstream 1.0kb upstream 2722 true scaffold_7: 14519-17240 Capsella rubella
Carub.0007s0004 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 16241-17240 Capsella rubella
Carub.0007s0004 1.0kb downstream 1.0kb downstream 2722 true scaffold_7: 13519-16240 Capsella rubella
Carub.0007s0004 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 13519-14518 Capsella rubella
Carub.0007s0004 2.0kb upstream 2.0kb upstream 3722 true scaffold_7: 14519-18240 Capsella rubella
Carub.0007s0004 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 16241-18240 Capsella rubella
Carub.0007s0004 2.0kb downstream 2.0kb downstream 3722 true scaffold_7: 12519-16240 Capsella rubella
Carub.0007s0004 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 12519-14518 Capsella rubella
Carub.0007s0004 5.0kb upstream 5.0kb upstream 6722 true scaffold_7: 14519-21240 Capsella rubella
Carub.0007s0004 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 16241-21240 Capsella rubella
Carub.0007s0004 5.0kb downstream 5.0kb downstream 6722 true scaffold_7: 9519-16240 Capsella rubella
Carub.0007s0004 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 9519-14518 Capsella rubella
Carub.0007s0004 10.0kb upstream 10.0kb upstream 11722 true scaffold_7: 14519-26240 Capsella rubella
Carub.0007s0004 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 16241-26240 Capsella rubella
Carub.0007s0004 10.0kb downstream 10.0kb downstream 11722 true scaffold_7: 4519-16240 Capsella rubella
Carub.0007s0004 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 4519-14518 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364918 5261 Brassicaceae View MSA
123834773 5264 Brassicales-Malvales View MSA
124343737 5266 SBM View MSA
124237408 5268 Malvidae View MSA
124062138 5270 Rosid View MSA
123738772 5271 Pentapetalae View MSA
122795104 5272 Eudicot View MSA
122042665 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121309997 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain