Gene : Carub.0007s0312 C. rubella v1.1
Defline:  (1 of 2) 6.3.4.21 - Nicotinate phosphoribosyltransferase / Nicotinic acid phosphoribosyltransferase Genomic Order:  312
Name:  ? Carub.0007s0312 Secondary Identifier:  ? PAC:39234708
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5381 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0312 0.5kb upstream 0.5kb upstream 3937 true scaffold_7: 1151135-1155071 Capsella rubella
Carub.0007s0312 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1151135-1151634 Capsella rubella
Carub.0007s0312 0.5kb downstream 0.5kb downstream 3937 true scaffold_7: 1151635-1155571 Capsella rubella
Carub.0007s0312 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1155072-1155571 Capsella rubella
Carub.0007s0312 1.0kb upstream 1.0kb upstream 4437 true scaffold_7: 1150635-1155071 Capsella rubella
Carub.0007s0312 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1150635-1151634 Capsella rubella
Carub.0007s0312 1.0kb downstream 1.0kb downstream 4437 true scaffold_7: 1151635-1156071 Capsella rubella
Carub.0007s0312 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1155072-1156071 Capsella rubella
Carub.0007s0312 2.0kb upstream 2.0kb upstream 5437 true scaffold_7: 1149635-1155071 Capsella rubella
Carub.0007s0312 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1149635-1151634 Capsella rubella
Carub.0007s0312 2.0kb downstream 2.0kb downstream 5437 true scaffold_7: 1151635-1157071 Capsella rubella
Carub.0007s0312 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1155072-1157071 Capsella rubella
Carub.0007s0312 5.0kb upstream 5.0kb upstream 8437 true scaffold_7: 1146635-1155071 Capsella rubella
Carub.0007s0312 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1146635-1151634 Capsella rubella
Carub.0007s0312 5.0kb downstream 5.0kb downstream 8437 true scaffold_7: 1151635-1160071 Capsella rubella
Carub.0007s0312 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1155072-1160071 Capsella rubella
Carub.0007s0312 10.0kb upstream 10.0kb upstream 13437 true scaffold_7: 1141635-1155071 Capsella rubella
Carub.0007s0312 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1141635-1151634 Capsella rubella
Carub.0007s0312 10.0kb downstream 10.0kb downstream 13437 true scaffold_7: 1151635-1165071 Capsella rubella
Carub.0007s0312 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1155072-1165071 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365718 5261 Brassicaceae View MSA
123799019 5264 Brassicales-Malvales View MSA
124348099 5266 SBM View MSA
124237112 5268 Malvidae View MSA
124065117 5270 Rosid View MSA
123744926 5271 Pentapetalae View MSA
122787936 5272 Eudicot View MSA
122047355 5273 Angiosperm View MSA
121346796 5274 Embryophyte View MSA
123425475 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain