Gene : Carub.0007s0319 C. rubella v1.1
Defline:  (1 of 2) PTHR10015//PTHR10015:SF166 - HEAT SHOCK TRANSCRIPTION FACTOR // HEAT STRESS TRANSCRIPTION FACTOR B-1 Genomic Order:  319
Name:  ? Carub.0007s0319 Secondary Identifier:  ? PAC:39232804
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0319 0.5kb upstream 0.5kb upstream 1848 true scaffold_7: 1177153-1179000 Capsella rubella
Carub.0007s0319 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1177153-1177652 Capsella rubella
Carub.0007s0319 0.5kb downstream 0.5kb downstream 1848 true scaffold_7: 1177653-1179500 Capsella rubella
Carub.0007s0319 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1179001-1179500 Capsella rubella
Carub.0007s0319 1.0kb upstream 1.0kb upstream 2348 true scaffold_7: 1176653-1179000 Capsella rubella
Carub.0007s0319 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1176653-1177652 Capsella rubella
Carub.0007s0319 1.0kb downstream 1.0kb downstream 2348 true scaffold_7: 1177653-1180000 Capsella rubella
Carub.0007s0319 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1179001-1180000 Capsella rubella
Carub.0007s0319 2.0kb upstream 2.0kb upstream 3348 true scaffold_7: 1175653-1179000 Capsella rubella
Carub.0007s0319 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1175653-1177652 Capsella rubella
Carub.0007s0319 2.0kb downstream 2.0kb downstream 3348 true scaffold_7: 1177653-1181000 Capsella rubella
Carub.0007s0319 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1179001-1181000 Capsella rubella
Carub.0007s0319 5.0kb upstream 5.0kb upstream 6348 true scaffold_7: 1172653-1179000 Capsella rubella
Carub.0007s0319 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1172653-1177652 Capsella rubella
Carub.0007s0319 5.0kb downstream 5.0kb downstream 6348 true scaffold_7: 1177653-1184000 Capsella rubella
Carub.0007s0319 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1179001-1184000 Capsella rubella
Carub.0007s0319 10.0kb upstream 10.0kb upstream 11348 true scaffold_7: 1167653-1179000 Capsella rubella
Carub.0007s0319 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1167653-1177652 Capsella rubella
Carub.0007s0319 10.0kb downstream 10.0kb downstream 11348 true scaffold_7: 1177653-1189000 Capsella rubella
Carub.0007s0319 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1179001-1189000 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373102 5261 Brassicaceae View MSA
123839033 5264 Brassicales-Malvales View MSA
124322541 5266 SBM View MSA
124246832 5268 Malvidae View MSA
124060729 5270 Rosid View MSA
123741072 5271 Pentapetalae View MSA
122797389 5272 Eudicot View MSA
122047819 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain