Gene : Carub.0006s3388 C. rubella v1.1
Defline:  (1 of 1) PTHR15657:SF1 - THYROID TRANSCRIPTION FACTOR 1-ASSOCIATED PROTEIN 26 Genomic Order:  3388
Name:  ? Carub.0006s3388 Secondary Identifier:  ? PAC:39246046
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3388 0.5kb upstream 0.5kb upstream 1769 true scaffold_6: 15286306-15288074 Capsella rubella
Carub.0006s3388 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 15287575-15288074 Capsella rubella
Carub.0006s3388 0.5kb downstream 0.5kb downstream 1769 true scaffold_6: 15285806-15287574 Capsella rubella
Carub.0006s3388 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 15285806-15286305 Capsella rubella
Carub.0006s3388 1.0kb upstream 1.0kb upstream 2269 true scaffold_6: 15286306-15288574 Capsella rubella
Carub.0006s3388 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 15287575-15288574 Capsella rubella
Carub.0006s3388 1.0kb downstream 1.0kb downstream 2269 true scaffold_6: 15285306-15287574 Capsella rubella
Carub.0006s3388 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 15285306-15286305 Capsella rubella
Carub.0006s3388 2.0kb upstream 2.0kb upstream 3269 true scaffold_6: 15286306-15289574 Capsella rubella
Carub.0006s3388 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 15287575-15289574 Capsella rubella
Carub.0006s3388 2.0kb downstream 2.0kb downstream 3269 true scaffold_6: 15284306-15287574 Capsella rubella
Carub.0006s3388 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 15284306-15286305 Capsella rubella
Carub.0006s3388 5.0kb upstream 5.0kb upstream 6269 true scaffold_6: 15286306-15292574 Capsella rubella
Carub.0006s3388 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 15287575-15292574 Capsella rubella
Carub.0006s3388 5.0kb downstream 5.0kb downstream 6269 true scaffold_6: 15281306-15287574 Capsella rubella
Carub.0006s3388 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 15281306-15286305 Capsella rubella
Carub.0006s3388 10.0kb upstream 10.0kb upstream 11269 true scaffold_6: 15286306-15297574 Capsella rubella
Carub.0006s3388 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 15287575-15297574 Capsella rubella
Carub.0006s3388 10.0kb downstream 10.0kb downstream 11269 true scaffold_6: 15276306-15287574 Capsella rubella
Carub.0006s3388 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 15276306-15286305 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371726 5261 Brassicaceae View MSA
123835051 5264 Brassicales-Malvales View MSA
124344375 5266 SBM View MSA
124248791 5268 Malvidae View MSA
124065929 5270 Rosid View MSA
123736421 5271 Pentapetalae View MSA
122791858 5272 Eudicot View MSA
122042448 5273 Angiosperm View MSA
121343985 5274 Embryophyte View MSA
123426667 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain