Gene : Carub.0006s3464 C. rubella v1.1
Defline:  (1 of 4) 2.1.1.229 - tRNA (carboxymethyluridine(34)-5-O)-methyltransferase / tRNA methyltransferase 9 Genomic Order:  3464
Name:  ? Carub.0006s3464 Secondary Identifier:  ? PAC:39248226
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6829 Capsella rubella pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3464 0.5kb upstream 0.5kb upstream 2342 true scaffold_6: 15576285-15578626 Capsella rubella
Carub.0006s3464 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 15578127-15578626 Capsella rubella
Carub.0006s3464 0.5kb downstream 0.5kb downstream 2342 true scaffold_6: 15575785-15578126 Capsella rubella
Carub.0006s3464 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 15575785-15576284 Capsella rubella
Carub.0006s3464 1.0kb upstream 1.0kb upstream 2842 true scaffold_6: 15576285-15579126 Capsella rubella
Carub.0006s3464 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 15578127-15579126 Capsella rubella
Carub.0006s3464 1.0kb downstream 1.0kb downstream 2842 true scaffold_6: 15575285-15578126 Capsella rubella
Carub.0006s3464 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 15575285-15576284 Capsella rubella
Carub.0006s3464 2.0kb upstream 2.0kb upstream 3842 true scaffold_6: 15576285-15580126 Capsella rubella
Carub.0006s3464 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 15578127-15580126 Capsella rubella
Carub.0006s3464 2.0kb downstream 2.0kb downstream 3842 true scaffold_6: 15574285-15578126 Capsella rubella
Carub.0006s3464 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 15574285-15576284 Capsella rubella
Carub.0006s3464 5.0kb upstream 5.0kb upstream 6842 true scaffold_6: 15576285-15583126 Capsella rubella
Carub.0006s3464 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 15578127-15583126 Capsella rubella
Carub.0006s3464 5.0kb downstream 5.0kb downstream 6842 true scaffold_6: 15571285-15578126 Capsella rubella
Carub.0006s3464 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 15571285-15576284 Capsella rubella
Carub.0006s3464 10.0kb upstream 10.0kb upstream 11842 true scaffold_6: 15576285-15588126 Capsella rubella
Carub.0006s3464 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 15578127-15588126 Capsella rubella
Carub.0006s3464 10.0kb downstream 10.0kb downstream 11842 true scaffold_6: 15566285-15578126 Capsella rubella
Carub.0006s3464 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 15566285-15576284 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370240 5261 Brassicaceae View MSA
123832419 5264 Brassicales-Malvales View MSA
124338560 5266 SBM View MSA
124243194 5268 Malvidae View MSA
124068599 5270 Rosid View MSA
123740892 5271 Pentapetalae View MSA
122793671 5272 Eudicot View MSA
122046991 5273 Angiosperm View MSA
121347521 5274 Embryophyte View MSA
123425237 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain