Gene : Carub.0006s3483 C. rubella v1.1
Defline:  (1 of 5) PTHR11945//PTHR11945:SF153 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL36-RELATED Genomic Order:  3483
Name:  ? Carub.0006s3483 Secondary Identifier:  ? PAC:39249927
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3483 0.5kb upstream 0.5kb upstream 1557 true scaffold_6: 15653461-15655017 Capsella rubella
Carub.0006s3483 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 15654518-15655017 Capsella rubella
Carub.0006s3483 0.5kb downstream 0.5kb downstream 1557 true scaffold_6: 15652961-15654517 Capsella rubella
Carub.0006s3483 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 15652961-15653460 Capsella rubella
Carub.0006s3483 1.0kb upstream 1.0kb upstream 2057 true scaffold_6: 15653461-15655517 Capsella rubella
Carub.0006s3483 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 15654518-15655517 Capsella rubella
Carub.0006s3483 1.0kb downstream 1.0kb downstream 2057 true scaffold_6: 15652461-15654517 Capsella rubella
Carub.0006s3483 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 15652461-15653460 Capsella rubella
Carub.0006s3483 2.0kb upstream 2.0kb upstream 3057 true scaffold_6: 15653461-15656517 Capsella rubella
Carub.0006s3483 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 15654518-15656517 Capsella rubella
Carub.0006s3483 2.0kb downstream 2.0kb downstream 3057 true scaffold_6: 15651461-15654517 Capsella rubella
Carub.0006s3483 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 15651461-15653460 Capsella rubella
Carub.0006s3483 5.0kb upstream 5.0kb upstream 6057 true scaffold_6: 15653461-15659517 Capsella rubella
Carub.0006s3483 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 15654518-15659517 Capsella rubella
Carub.0006s3483 5.0kb downstream 5.0kb downstream 6057 true scaffold_6: 15648461-15654517 Capsella rubella
Carub.0006s3483 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 15648461-15653460 Capsella rubella
Carub.0006s3483 10.0kb upstream 10.0kb upstream 11057 true scaffold_6: 15653461-15664517 Capsella rubella
Carub.0006s3483 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 15654518-15664517 Capsella rubella
Carub.0006s3483 10.0kb downstream 10.0kb downstream 11057 true scaffold_6: 15643461-15654517 Capsella rubella
Carub.0006s3483 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 15643461-15653460 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122336961 5261 Brassicaceae Singleton cluster - no MSA
123842975 5264 Brassicales-Malvales View MSA
124323905 5266 SBM View MSA
124254245 5268 Malvidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain