Gene : Carub.0006s3516 C. rubella v1.1
Defline:  (1 of 1) PTHR11361//PTHR11361:SF89 - DNA MISMATCH REPAIR MUTS RELATED PROTEINS // DNA MISMATCH REPAIR PROTEIN MSH6 Genomic Order:  3516
Name:  ? Carub.0006s3516 Secondary Identifier:  ? PAC:39246421
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3516 0.5kb upstream 0.5kb upstream 7955 true scaffold_6: 15801811-15809765 Capsella rubella
Carub.0006s3516 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 15809266-15809765 Capsella rubella
Carub.0006s3516 0.5kb downstream 0.5kb downstream 7955 true scaffold_6: 15801311-15809265 Capsella rubella
Carub.0006s3516 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 15801311-15801810 Capsella rubella
Carub.0006s3516 1.0kb upstream 1.0kb upstream 8455 true scaffold_6: 15801811-15810265 Capsella rubella
Carub.0006s3516 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 15809266-15810265 Capsella rubella
Carub.0006s3516 1.0kb downstream 1.0kb downstream 8455 true scaffold_6: 15800811-15809265 Capsella rubella
Carub.0006s3516 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 15800811-15801810 Capsella rubella
Carub.0006s3516 2.0kb upstream 2.0kb upstream 9455 true scaffold_6: 15801811-15811265 Capsella rubella
Carub.0006s3516 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 15809266-15811265 Capsella rubella
Carub.0006s3516 2.0kb downstream 2.0kb downstream 9455 true scaffold_6: 15799811-15809265 Capsella rubella
Carub.0006s3516 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 15799811-15801810 Capsella rubella
Carub.0006s3516 5.0kb upstream 5.0kb upstream 12455 true scaffold_6: 15801811-15814265 Capsella rubella
Carub.0006s3516 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 15809266-15814265 Capsella rubella
Carub.0006s3516 5.0kb downstream 5.0kb downstream 12455 true scaffold_6: 15796811-15809265 Capsella rubella
Carub.0006s3516 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 15796811-15801810 Capsella rubella
Carub.0006s3516 10.0kb upstream 10.0kb upstream 17455 true scaffold_6: 15801811-15819265 Capsella rubella
Carub.0006s3516 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 15809266-15819265 Capsella rubella
Carub.0006s3516 10.0kb downstream 10.0kb downstream 17455 true scaffold_6: 15791811-15809265 Capsella rubella
Carub.0006s3516 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 15791811-15801810 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371889 5261 Brassicaceae View MSA
123831702 5264 Brassicales-Malvales View MSA
124346183 5266 SBM View MSA
124252379 5268 Malvidae View MSA
124062676 5270 Rosid View MSA
123736808 5271 Pentapetalae View MSA
122787445 5272 Eudicot View MSA
122041770 5273 Angiosperm View MSA
121347464 5274 Embryophyte View MSA
123426480 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain