Gene : Carub.0006s1771 C. rubella v1.1
Defline:  (1 of 1) PF00581//PF00639 - Rhodanese-like domain (Rhodanese) // PPIC-type PPIASE domain (Rotamase) Genomic Order:  1771
Name:  ? Carub.0006s1771 Secondary Identifier:  ? PAC:39247256
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1771 0.5kb upstream 0.5kb upstream 3104 true scaffold_6: 6558972-6562075 Capsella rubella
Carub.0006s1771 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 6561576-6562075 Capsella rubella
Carub.0006s1771 0.5kb downstream 0.5kb downstream 3104 true scaffold_6: 6558472-6561575 Capsella rubella
Carub.0006s1771 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 6558472-6558971 Capsella rubella
Carub.0006s1771 1.0kb upstream 1.0kb upstream 3604 true scaffold_6: 6558972-6562575 Capsella rubella
Carub.0006s1771 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 6561576-6562575 Capsella rubella
Carub.0006s1771 1.0kb downstream 1.0kb downstream 3604 true scaffold_6: 6557972-6561575 Capsella rubella
Carub.0006s1771 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 6557972-6558971 Capsella rubella
Carub.0006s1771 2.0kb upstream 2.0kb upstream 4604 true scaffold_6: 6558972-6563575 Capsella rubella
Carub.0006s1771 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 6561576-6563575 Capsella rubella
Carub.0006s1771 2.0kb downstream 2.0kb downstream 4604 true scaffold_6: 6556972-6561575 Capsella rubella
Carub.0006s1771 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 6556972-6558971 Capsella rubella
Carub.0006s1771 5.0kb upstream 5.0kb upstream 7604 true scaffold_6: 6558972-6566575 Capsella rubella
Carub.0006s1771 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 6561576-6566575 Capsella rubella
Carub.0006s1771 5.0kb downstream 5.0kb downstream 7604 true scaffold_6: 6553972-6561575 Capsella rubella
Carub.0006s1771 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 6553972-6558971 Capsella rubella
Carub.0006s1771 10.0kb upstream 10.0kb upstream 12604 true scaffold_6: 6558972-6571575 Capsella rubella
Carub.0006s1771 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 6561576-6571575 Capsella rubella
Carub.0006s1771 10.0kb downstream 10.0kb downstream 12604 true scaffold_6: 6548972-6561575 Capsella rubella
Carub.0006s1771 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 6548972-6558971 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372117 5261 Brassicaceae View MSA
123835814 5264 Brassicales-Malvales View MSA
124322093 5266 SBM View MSA
124241573 5268 Malvidae View MSA
124073130 5270 Rosid View MSA
123738142 5271 Pentapetalae View MSA
122789863 5272 Eudicot View MSA
122041568 5273 Angiosperm View MSA
123429014 5275 Viridiplantae View MSA
121344744 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain