Gene : Carub.0006s1782 C. rubella v1.1
Defline:  (1 of 2) PTHR22536 - LUNG CANCER METASTASIS-RELATED LCMR1 PROTEIN Genomic Order:  1782
Name:  ? Carub.0006s1782 Secondary Identifier:  ? PAC:39246484
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1782 0.5kb upstream 0.5kb upstream 2478 true scaffold_6: 6602852-6605329 Capsella rubella
Carub.0006s1782 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 6602852-6603351 Capsella rubella
Carub.0006s1782 0.5kb downstream 0.5kb downstream 2478 true scaffold_6: 6603352-6605829 Capsella rubella
Carub.0006s1782 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 6605330-6605829 Capsella rubella
Carub.0006s1782 1.0kb upstream 1.0kb upstream 2978 true scaffold_6: 6602352-6605329 Capsella rubella
Carub.0006s1782 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 6602352-6603351 Capsella rubella
Carub.0006s1782 1.0kb downstream 1.0kb downstream 2978 true scaffold_6: 6603352-6606329 Capsella rubella
Carub.0006s1782 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 6605330-6606329 Capsella rubella
Carub.0006s1782 2.0kb upstream 2.0kb upstream 3978 true scaffold_6: 6601352-6605329 Capsella rubella
Carub.0006s1782 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 6601352-6603351 Capsella rubella
Carub.0006s1782 2.0kb downstream 2.0kb downstream 3978 true scaffold_6: 6603352-6607329 Capsella rubella
Carub.0006s1782 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 6605330-6607329 Capsella rubella
Carub.0006s1782 5.0kb upstream 5.0kb upstream 6978 true scaffold_6: 6598352-6605329 Capsella rubella
Carub.0006s1782 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 6598352-6603351 Capsella rubella
Carub.0006s1782 5.0kb downstream 5.0kb downstream 6978 true scaffold_6: 6603352-6610329 Capsella rubella
Carub.0006s1782 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 6605330-6610329 Capsella rubella
Carub.0006s1782 10.0kb upstream 10.0kb upstream 11978 true scaffold_6: 6593352-6605329 Capsella rubella
Carub.0006s1782 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 6593352-6603351 Capsella rubella
Carub.0006s1782 10.0kb downstream 10.0kb downstream 11978 true scaffold_6: 6603352-6615329 Capsella rubella
Carub.0006s1782 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 6605330-6615329 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371492 5261 Brassicaceae View MSA
123800172 5264 Brassicales-Malvales View MSA
124297617 5266 SBM View MSA
124149456 5268 Malvidae View MSA
124074053 5270 Rosid View MSA
123743720 5271 Pentapetalae View MSA
122789289 5272 Eudicot View MSA
122041858 5273 Angiosperm View MSA
121345817 5274 Embryophyte View MSA
123425736 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain