Gene : Carub.0006s2148 C. rubella v1.1
Defline:  (1 of 3) K10143 - E3 ubiquitin-protein ligase RFWD2 (RFWD2, COP1) Genomic Order:  2148
Name:  ? Carub.0006s2148 Secondary Identifier:  ? PAC:39247501
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2148 0.5kb upstream 0.5kb upstream 1616 true scaffold_6: 8053259-8054874 Capsella rubella
Carub.0006s2148 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 8053259-8053758 Capsella rubella
Carub.0006s2148 0.5kb downstream 0.5kb downstream 1616 true scaffold_6: 8053759-8055374 Capsella rubella
Carub.0006s2148 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 8054875-8055374 Capsella rubella
Carub.0006s2148 1.0kb upstream 1.0kb upstream 2116 true scaffold_6: 8052759-8054874 Capsella rubella
Carub.0006s2148 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 8052759-8053758 Capsella rubella
Carub.0006s2148 1.0kb downstream 1.0kb downstream 2116 true scaffold_6: 8053759-8055874 Capsella rubella
Carub.0006s2148 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 8054875-8055874 Capsella rubella
Carub.0006s2148 2.0kb upstream 2.0kb upstream 3116 true scaffold_6: 8051759-8054874 Capsella rubella
Carub.0006s2148 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 8051759-8053758 Capsella rubella
Carub.0006s2148 2.0kb downstream 2.0kb downstream 3116 true scaffold_6: 8053759-8056874 Capsella rubella
Carub.0006s2148 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 8054875-8056874 Capsella rubella
Carub.0006s2148 5.0kb upstream 5.0kb upstream 6116 true scaffold_6: 8048759-8054874 Capsella rubella
Carub.0006s2148 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 8048759-8053758 Capsella rubella
Carub.0006s2148 5.0kb downstream 5.0kb downstream 6116 true scaffold_6: 8053759-8059874 Capsella rubella
Carub.0006s2148 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 8054875-8059874 Capsella rubella
Carub.0006s2148 10.0kb upstream 10.0kb upstream 11116 true scaffold_6: 8043759-8054874 Capsella rubella
Carub.0006s2148 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 8043759-8053758 Capsella rubella
Carub.0006s2148 10.0kb downstream 10.0kb downstream 11116 true scaffold_6: 8053759-8064874 Capsella rubella
Carub.0006s2148 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 8054875-8064874 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377292 5261 Brassicaceae View MSA
123837703 5264 Brassicales-Malvales View MSA
124342825 5266 SBM View MSA
124249786 5268 Malvidae View MSA
124051447 5270 Rosid View MSA
123749693 5271 Pentapetalae View MSA
122793878 5272 Eudicot View MSA
122043681 5273 Angiosperm View MSA
121350599 5274 Embryophyte View MSA
123427986 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain