Gene : Carub.0006s2143 C. rubella v1.1
Defline:  (1 of 3) PTHR10627 - SCP160 Genomic Order:  2143
Name:  ? Carub.0006s2143 Secondary Identifier:  ? PAC:39246363
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2143 0.5kb upstream 0.5kb upstream 1358 true scaffold_6: 8037528-8038885 Capsella rubella
Carub.0006s2143 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 8038386-8038885 Capsella rubella
Carub.0006s2143 0.5kb downstream 0.5kb downstream 1358 true scaffold_6: 8037028-8038385 Capsella rubella
Carub.0006s2143 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 8037028-8037527 Capsella rubella
Carub.0006s2143 1.0kb upstream 1.0kb upstream 1858 true scaffold_6: 8037528-8039385 Capsella rubella
Carub.0006s2143 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 8038386-8039385 Capsella rubella
Carub.0006s2143 1.0kb downstream 1.0kb downstream 1858 true scaffold_6: 8036528-8038385 Capsella rubella
Carub.0006s2143 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 8036528-8037527 Capsella rubella
Carub.0006s2143 2.0kb upstream 2.0kb upstream 2858 true scaffold_6: 8037528-8040385 Capsella rubella
Carub.0006s2143 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 8038386-8040385 Capsella rubella
Carub.0006s2143 2.0kb downstream 2.0kb downstream 2858 true scaffold_6: 8035528-8038385 Capsella rubella
Carub.0006s2143 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 8035528-8037527 Capsella rubella
Carub.0006s2143 5.0kb upstream 5.0kb upstream 5858 true scaffold_6: 8037528-8043385 Capsella rubella
Carub.0006s2143 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 8038386-8043385 Capsella rubella
Carub.0006s2143 5.0kb downstream 5.0kb downstream 5858 true scaffold_6: 8032528-8038385 Capsella rubella
Carub.0006s2143 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 8032528-8037527 Capsella rubella
Carub.0006s2143 10.0kb upstream 10.0kb upstream 10858 true scaffold_6: 8037528-8048385 Capsella rubella
Carub.0006s2143 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 8038386-8048385 Capsella rubella
Carub.0006s2143 10.0kb downstream 10.0kb downstream 10858 true scaffold_6: 8027528-8038385 Capsella rubella
Carub.0006s2143 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 8027528-8037527 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375794 5261 Brassicaceae View MSA
123840750 5264 Brassicales-Malvales View MSA
124338382 5266 SBM View MSA
124238140 5268 Malvidae View MSA
124071735 5270 Rosid View MSA
123744350 5271 Pentapetalae View MSA
122788002 5272 Eudicot View MSA
122041679 5273 Angiosperm View MSA
121347667 5274 Embryophyte View MSA
123380594 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain