Gene : Carub.0006s2348 C. rubella v1.1

Defline:  (1 of 1) PTHR31236//PTHR31236:SF2 - FAMILY NOT NAMED // DEHYDRATION-RESPONSIVE PROTEIN RD22 Genomic Order:  2348
Name:  ? Carub.0006s2348 Secondary Identifier:  ? PAC:39249015

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2348 0.5kb upstream 0.5kb upstream 2507 true scaffold_6: 8921108-8923614 Capsella rubella
Carub.0006s2348 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 8923115-8923614 Capsella rubella
Carub.0006s2348 0.5kb downstream 0.5kb downstream 2507 true scaffold_6: 8920608-8923114 Capsella rubella
Carub.0006s2348 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 8920608-8921107 Capsella rubella
Carub.0006s2348 1.0kb upstream 1.0kb upstream 3007 true scaffold_6: 8921108-8924114 Capsella rubella
Carub.0006s2348 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 8923115-8924114 Capsella rubella
Carub.0006s2348 1.0kb downstream 1.0kb downstream 3007 true scaffold_6: 8920108-8923114 Capsella rubella
Carub.0006s2348 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 8920108-8921107 Capsella rubella
Carub.0006s2348 2.0kb upstream 2.0kb upstream 4007 true scaffold_6: 8921108-8925114 Capsella rubella
Carub.0006s2348 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 8923115-8925114 Capsella rubella
Carub.0006s2348 2.0kb downstream 2.0kb downstream 4007 true scaffold_6: 8919108-8923114 Capsella rubella
Carub.0006s2348 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 8919108-8921107 Capsella rubella
Carub.0006s2348 5.0kb upstream 5.0kb upstream 7007 true scaffold_6: 8921108-8928114 Capsella rubella
Carub.0006s2348 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 8923115-8928114 Capsella rubella
Carub.0006s2348 5.0kb downstream 5.0kb downstream 7007 true scaffold_6: 8916108-8923114 Capsella rubella
Carub.0006s2348 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 8916108-8921107 Capsella rubella
Carub.0006s2348 10.0kb upstream 10.0kb upstream 12007 true scaffold_6: 8921108-8933114 Capsella rubella
Carub.0006s2348 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 8923115-8933114 Capsella rubella
Carub.0006s2348 10.0kb downstream 10.0kb downstream 12007 true scaffold_6: 8911108-8923114 Capsella rubella
Carub.0006s2348 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 8911108-8921107 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360777 5261 Brassicaceae View MSA
123838044 5264 Brassicales-Malvales View MSA
124336891 5266 SBM View MSA
124250399 5268 Malvidae View MSA
124074316 5270 Rosid View MSA
123753290 5271 Pentapetalae View MSA
122797673 5272 Eudicot View MSA
122050943 5273 Angiosperm View MSA
121351029 5274 Embryophyte View MSA
123381981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain