Gene : Carub.0006s2349 C. rubella v1.1
Defline:  (1 of 4) PTHR23023//PTHR23023:SF37 - DIMETHYLANILINE MONOOXYGENASE // INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA2-RELATED Genomic Order:  2349
Name:  ? Carub.0006s2349 Secondary Identifier:  ? PAC:39247880
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWYDQC-4 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2349 0.5kb upstream 0.5kb upstream 3818 true scaffold_6: 8933304-8937121 Capsella rubella
Carub.0006s2349 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 8936622-8937121 Capsella rubella
Carub.0006s2349 0.5kb downstream 0.5kb downstream 3818 true scaffold_6: 8932804-8936621 Capsella rubella
Carub.0006s2349 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 8932804-8933303 Capsella rubella
Carub.0006s2349 1.0kb upstream 1.0kb upstream 4318 true scaffold_6: 8933304-8937621 Capsella rubella
Carub.0006s2349 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 8936622-8937621 Capsella rubella
Carub.0006s2349 1.0kb downstream 1.0kb downstream 4318 true scaffold_6: 8932304-8936621 Capsella rubella
Carub.0006s2349 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 8932304-8933303 Capsella rubella
Carub.0006s2349 2.0kb upstream 2.0kb upstream 5318 true scaffold_6: 8933304-8938621 Capsella rubella
Carub.0006s2349 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 8936622-8938621 Capsella rubella
Carub.0006s2349 2.0kb downstream 2.0kb downstream 5318 true scaffold_6: 8931304-8936621 Capsella rubella
Carub.0006s2349 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 8931304-8933303 Capsella rubella
Carub.0006s2349 5.0kb upstream 5.0kb upstream 8318 true scaffold_6: 8933304-8941621 Capsella rubella
Carub.0006s2349 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 8936622-8941621 Capsella rubella
Carub.0006s2349 5.0kb downstream 5.0kb downstream 8318 true scaffold_6: 8928304-8936621 Capsella rubella
Carub.0006s2349 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 8928304-8933303 Capsella rubella
Carub.0006s2349 10.0kb upstream 10.0kb upstream 13318 true scaffold_6: 8933304-8946621 Capsella rubella
Carub.0006s2349 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 8936622-8946621 Capsella rubella
Carub.0006s2349 10.0kb downstream 10.0kb downstream 13318 true scaffold_6: 8923304-8936621 Capsella rubella
Carub.0006s2349 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 8923304-8933303 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371447 5261 Brassicaceae View MSA
123834592 5264 Brassicales-Malvales View MSA
124345724 5266 SBM View MSA
124244331 5268 Malvidae View MSA
124069370 5270 Rosid View MSA
123747095 5271 Pentapetalae View MSA
122790040 5272 Eudicot View MSA
122050610 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain