Gene : Carub.0006s1915 C. rubella v1.1
Defline:  (1 of 1) PTHR31707:SF19 - PECTINESTERASE/PECTINESTERASE INHIBITOR 54-RELATED Genomic Order:  1915
Name:  ? Carub.0006s1915 Secondary Identifier:  ? PAC:39246480
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-1081 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1915 0.5kb upstream 0.5kb upstream 2534 true scaffold_6: 7097476-7100009 Capsella rubella
Carub.0006s1915 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 7099510-7100009 Capsella rubella
Carub.0006s1915 0.5kb downstream 0.5kb downstream 2534 true scaffold_6: 7096976-7099509 Capsella rubella
Carub.0006s1915 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 7096976-7097475 Capsella rubella
Carub.0006s1915 1.0kb upstream 1.0kb upstream 3034 true scaffold_6: 7097476-7100509 Capsella rubella
Carub.0006s1915 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 7099510-7100509 Capsella rubella
Carub.0006s1915 1.0kb downstream 1.0kb downstream 3034 true scaffold_6: 7096476-7099509 Capsella rubella
Carub.0006s1915 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 7096476-7097475 Capsella rubella
Carub.0006s1915 2.0kb upstream 2.0kb upstream 4034 true scaffold_6: 7097476-7101509 Capsella rubella
Carub.0006s1915 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 7099510-7101509 Capsella rubella
Carub.0006s1915 2.0kb downstream 2.0kb downstream 4034 true scaffold_6: 7095476-7099509 Capsella rubella
Carub.0006s1915 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 7095476-7097475 Capsella rubella
Carub.0006s1915 5.0kb upstream 5.0kb upstream 7034 true scaffold_6: 7097476-7104509 Capsella rubella
Carub.0006s1915 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 7099510-7104509 Capsella rubella
Carub.0006s1915 5.0kb downstream 5.0kb downstream 7034 true scaffold_6: 7092476-7099509 Capsella rubella
Carub.0006s1915 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 7092476-7097475 Capsella rubella
Carub.0006s1915 10.0kb upstream 10.0kb upstream 12034 true scaffold_6: 7097476-7109509 Capsella rubella
Carub.0006s1915 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 7099510-7109509 Capsella rubella
Carub.0006s1915 10.0kb downstream 10.0kb downstream 12034 true scaffold_6: 7087476-7099509 Capsella rubella
Carub.0006s1915 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 7087476-7097475 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041117 5273 Angiosperm View MSA
122378785 5261 Brassicaceae View MSA
123828597 5264 Brassicales-Malvales View MSA
124343715 5266 SBM View MSA
124243570 5268 Malvidae View MSA
124066033 5270 Rosid View MSA
123738499 5271 Pentapetalae View MSA
122787006 5272 Eudicot View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain