Gene : Carub.0006s1928 C. rubella v1.1
Defline:  (1 of 2) K11817 - indole-3-acetaldehyde oxidase (AAO1_2) Genomic Order:  1928
Name:  ? Carub.0006s1928 Secondary Identifier:  ? PAC:39246827
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1928 0.5kb upstream 0.5kb upstream 6377 true scaffold_6: 7140031-7146407 Capsella rubella
Carub.0006s1928 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 7140031-7140530 Capsella rubella
Carub.0006s1928 0.5kb downstream 0.5kb downstream 6377 true scaffold_6: 7140531-7146907 Capsella rubella
Carub.0006s1928 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 7146408-7146907 Capsella rubella
Carub.0006s1928 1.0kb upstream 1.0kb upstream 6877 true scaffold_6: 7139531-7146407 Capsella rubella
Carub.0006s1928 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 7139531-7140530 Capsella rubella
Carub.0006s1928 1.0kb downstream 1.0kb downstream 6877 true scaffold_6: 7140531-7147407 Capsella rubella
Carub.0006s1928 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 7146408-7147407 Capsella rubella
Carub.0006s1928 2.0kb upstream 2.0kb upstream 7877 true scaffold_6: 7138531-7146407 Capsella rubella
Carub.0006s1928 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 7138531-7140530 Capsella rubella
Carub.0006s1928 2.0kb downstream 2.0kb downstream 7877 true scaffold_6: 7140531-7148407 Capsella rubella
Carub.0006s1928 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 7146408-7148407 Capsella rubella
Carub.0006s1928 5.0kb upstream 5.0kb upstream 10877 true scaffold_6: 7135531-7146407 Capsella rubella
Carub.0006s1928 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 7135531-7140530 Capsella rubella
Carub.0006s1928 5.0kb downstream 5.0kb downstream 10877 true scaffold_6: 7140531-7151407 Capsella rubella
Carub.0006s1928 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 7146408-7151407 Capsella rubella
Carub.0006s1928 10.0kb upstream 10.0kb upstream 15877 true scaffold_6: 7130531-7146407 Capsella rubella
Carub.0006s1928 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 7130531-7140530 Capsella rubella
Carub.0006s1928 10.0kb downstream 10.0kb downstream 15877 true scaffold_6: 7140531-7156407 Capsella rubella
Carub.0006s1928 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 7146408-7156407 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375155 5261 Brassicaceae View MSA
123839082 5264 Brassicales-Malvales View MSA
124342435 5266 SBM View MSA
124239057 5268 Malvidae View MSA
124064752 5270 Rosid View MSA
123746349 5271 Pentapetalae View MSA
122793870 5272 Eudicot View MSA
122051504 5273 Angiosperm View MSA
121345384 5274 Embryophyte View MSA
123426829 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain