Gene : Carub.0003s2568 C. rubella v1.1

Defline:  (1 of 2) PTHR23130//PTHR23130:SF95 - FAMILY NOT NAMED // AUXIN-RESPONSIVE PROTEIN-RELATED Genomic Order:  2568
Name:  ? Carub.0003s2568 Secondary Identifier:  ? PAC:39241333

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2568 0.5kb upstream 0.5kb upstream 2029 true scaffold_3: 9572486-9574514 Capsella rubella
Carub.0003s2568 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 9572486-9572985 Capsella rubella
Carub.0003s2568 0.5kb downstream 0.5kb downstream 2029 true scaffold_3: 9572986-9575014 Capsella rubella
Carub.0003s2568 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 9574515-9575014 Capsella rubella
Carub.0003s2568 1.0kb upstream 1.0kb upstream 2529 true scaffold_3: 9571986-9574514 Capsella rubella
Carub.0003s2568 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 9571986-9572985 Capsella rubella
Carub.0003s2568 1.0kb downstream 1.0kb downstream 2529 true scaffold_3: 9572986-9575514 Capsella rubella
Carub.0003s2568 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 9574515-9575514 Capsella rubella
Carub.0003s2568 2.0kb upstream 2.0kb upstream 3529 true scaffold_3: 9570986-9574514 Capsella rubella
Carub.0003s2568 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 9570986-9572985 Capsella rubella
Carub.0003s2568 2.0kb downstream 2.0kb downstream 3529 true scaffold_3: 9572986-9576514 Capsella rubella
Carub.0003s2568 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 9574515-9576514 Capsella rubella
Carub.0003s2568 5.0kb upstream 5.0kb upstream 6529 true scaffold_3: 9567986-9574514 Capsella rubella
Carub.0003s2568 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 9567986-9572985 Capsella rubella
Carub.0003s2568 5.0kb downstream 5.0kb downstream 6529 true scaffold_3: 9572986-9579514 Capsella rubella
Carub.0003s2568 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 9574515-9579514 Capsella rubella
Carub.0003s2568 10.0kb upstream 10.0kb upstream 11529 true scaffold_3: 9562986-9574514 Capsella rubella
Carub.0003s2568 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 9562986-9572985 Capsella rubella
Carub.0003s2568 10.0kb downstream 10.0kb downstream 11529 true scaffold_3: 9572986-9584514 Capsella rubella
Carub.0003s2568 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 9574515-9584514 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369448 5261 Brassicaceae View MSA
123838754 5264 Brassicales-Malvales View MSA
124336764 5266 SBM View MSA
124253692 5268 Malvidae View MSA
124072358 5270 Rosid View MSA
123745373 5271 Pentapetalae View MSA
122787845 5272 Eudicot View MSA
122050744 5273 Angiosperm View MSA
121348347 5274 Embryophyte View MSA
123428624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain