Gene : Carub.0003s2615 C. rubella v1.1
Defline:  (1 of 2) K03236 - translation initiation factor 1A (EIF1A) Genomic Order:  2615
Name:  ? Carub.0003s2615 Secondary Identifier:  ? PAC:39240509
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2615 0.5kb upstream 0.5kb upstream 1648 true scaffold_3: 9779077-9780724 Capsella rubella
Carub.0003s2615 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 9780225-9780724 Capsella rubella
Carub.0003s2615 0.5kb downstream 0.5kb downstream 1648 true scaffold_3: 9778577-9780224 Capsella rubella
Carub.0003s2615 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 9778577-9779076 Capsella rubella
Carub.0003s2615 1.0kb upstream 1.0kb upstream 2148 true scaffold_3: 9779077-9781224 Capsella rubella
Carub.0003s2615 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 9780225-9781224 Capsella rubella
Carub.0003s2615 1.0kb downstream 1.0kb downstream 2148 true scaffold_3: 9778077-9780224 Capsella rubella
Carub.0003s2615 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 9778077-9779076 Capsella rubella
Carub.0003s2615 2.0kb upstream 2.0kb upstream 3148 true scaffold_3: 9779077-9782224 Capsella rubella
Carub.0003s2615 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 9780225-9782224 Capsella rubella
Carub.0003s2615 2.0kb downstream 2.0kb downstream 3148 true scaffold_3: 9777077-9780224 Capsella rubella
Carub.0003s2615 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 9777077-9779076 Capsella rubella
Carub.0003s2615 5.0kb upstream 5.0kb upstream 6148 true scaffold_3: 9779077-9785224 Capsella rubella
Carub.0003s2615 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 9780225-9785224 Capsella rubella
Carub.0003s2615 5.0kb downstream 5.0kb downstream 6148 true scaffold_3: 9774077-9780224 Capsella rubella
Carub.0003s2615 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 9774077-9779076 Capsella rubella
Carub.0003s2615 10.0kb upstream 10.0kb upstream 11148 true scaffold_3: 9779077-9790224 Capsella rubella
Carub.0003s2615 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 9780225-9790224 Capsella rubella
Carub.0003s2615 10.0kb downstream 10.0kb downstream 11148 true scaffold_3: 9769077-9780224 Capsella rubella
Carub.0003s2615 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 9769077-9779076 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377038 5261 Brassicaceae View MSA
123836382 5264 Brassicales-Malvales View MSA
124341992 5266 SBM View MSA
124243826 5268 Malvidae View MSA
124067350 5270 Rosid View MSA
123749124 5271 Pentapetalae View MSA
122789078 5272 Eudicot View MSA
122047152 5273 Angiosperm View MSA
121349077 5274 Embryophyte View MSA
123428812 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain