Gene : Carub.0003s2495 C. rubella v1.1

Defline:  (1 of 1) 6.3.4.19 - tRNA(Ile)-lysidine synthetase / Isoleucine-specific transfer ribonucleate lysidine synthetase Genomic Order:  2495
Name:  ? Carub.0003s2495 Secondary Identifier:  ? PAC:39241330

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2495 0.5kb upstream 0.5kb upstream 3369 true scaffold_3: 9257471-9260839 Capsella rubella
Carub.0003s2495 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 9257471-9257970 Capsella rubella
Carub.0003s2495 0.5kb downstream 0.5kb downstream 3369 true scaffold_3: 9257971-9261339 Capsella rubella
Carub.0003s2495 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 9260840-9261339 Capsella rubella
Carub.0003s2495 1.0kb upstream 1.0kb upstream 3869 true scaffold_3: 9256971-9260839 Capsella rubella
Carub.0003s2495 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 9256971-9257970 Capsella rubella
Carub.0003s2495 1.0kb downstream 1.0kb downstream 3869 true scaffold_3: 9257971-9261839 Capsella rubella
Carub.0003s2495 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 9260840-9261839 Capsella rubella
Carub.0003s2495 2.0kb upstream 2.0kb upstream 4869 true scaffold_3: 9255971-9260839 Capsella rubella
Carub.0003s2495 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 9255971-9257970 Capsella rubella
Carub.0003s2495 2.0kb downstream 2.0kb downstream 4869 true scaffold_3: 9257971-9262839 Capsella rubella
Carub.0003s2495 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 9260840-9262839 Capsella rubella
Carub.0003s2495 5.0kb upstream 5.0kb upstream 7869 true scaffold_3: 9252971-9260839 Capsella rubella
Carub.0003s2495 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 9252971-9257970 Capsella rubella
Carub.0003s2495 5.0kb downstream 5.0kb downstream 7869 true scaffold_3: 9257971-9265839 Capsella rubella
Carub.0003s2495 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 9260840-9265839 Capsella rubella
Carub.0003s2495 10.0kb upstream 10.0kb upstream 12869 true scaffold_3: 9247971-9260839 Capsella rubella
Carub.0003s2495 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 9247971-9257970 Capsella rubella
Carub.0003s2495 10.0kb downstream 10.0kb downstream 12869 true scaffold_3: 9257971-9270839 Capsella rubella
Carub.0003s2495 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 9260840-9270839 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026304 5273 Angiosperm View MSA
122362681 5261 Brassicaceae View MSA
123833208 5264 Brassicales-Malvales View MSA
124339388 5266 SBM View MSA
124238064 5268 Malvidae View MSA
124063792 5270 Rosid View MSA
123738903 5271 Pentapetalae View MSA
122792916 5272 Eudicot View MSA
121345916 5274 Embryophyte View MSA
123380288 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain