Gene : Carub.0003s2134 C. rubella v1.1
Defline:  (1 of 2) PTHR31042//PTHR31042:SF24 - FAMILY NOT NAMED // CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN Genomic Order:  2134
Name:  ? Carub.0003s2134 Secondary Identifier:  ? PAC:39240831
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2134 0.5kb upstream 0.5kb upstream 1892 true scaffold_3: 7704176-7706067 Capsella rubella
Carub.0003s2134 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 7704176-7704675 Capsella rubella
Carub.0003s2134 0.5kb downstream 0.5kb downstream 1892 true scaffold_3: 7704676-7706567 Capsella rubella
Carub.0003s2134 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 7706068-7706567 Capsella rubella
Carub.0003s2134 1.0kb upstream 1.0kb upstream 2392 true scaffold_3: 7703676-7706067 Capsella rubella
Carub.0003s2134 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 7703676-7704675 Capsella rubella
Carub.0003s2134 1.0kb downstream 1.0kb downstream 2392 true scaffold_3: 7704676-7707067 Capsella rubella
Carub.0003s2134 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 7706068-7707067 Capsella rubella
Carub.0003s2134 2.0kb upstream 2.0kb upstream 3392 true scaffold_3: 7702676-7706067 Capsella rubella
Carub.0003s2134 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 7702676-7704675 Capsella rubella
Carub.0003s2134 2.0kb downstream 2.0kb downstream 3392 true scaffold_3: 7704676-7708067 Capsella rubella
Carub.0003s2134 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 7706068-7708067 Capsella rubella
Carub.0003s2134 5.0kb upstream 5.0kb upstream 6392 true scaffold_3: 7699676-7706067 Capsella rubella
Carub.0003s2134 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 7699676-7704675 Capsella rubella
Carub.0003s2134 5.0kb downstream 5.0kb downstream 6392 true scaffold_3: 7704676-7711067 Capsella rubella
Carub.0003s2134 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 7706068-7711067 Capsella rubella
Carub.0003s2134 10.0kb upstream 10.0kb upstream 11392 true scaffold_3: 7694676-7706067 Capsella rubella
Carub.0003s2134 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 7694676-7704675 Capsella rubella
Carub.0003s2134 10.0kb downstream 10.0kb downstream 11392 true scaffold_3: 7704676-7716067 Capsella rubella
Carub.0003s2134 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 7706068-7716067 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041085 5273 Angiosperm View MSA
122360582 5261 Brassicaceae View MSA
123797983 5264 Brassicales-Malvales View MSA
124295674 5266 SBM View MSA
124253305 5268 Malvidae View MSA
124070934 5270 Rosid View MSA
123745027 5271 Pentapetalae View MSA
122787278 5272 Eudicot View MSA
121351490 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain