Gene : Carub.0003s2197 C. rubella v1.1
Defline:  (1 of 2) PTHR10811//PTHR10811:SF25 - FRINGE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2197
Name:  ? Carub.0003s2197 Secondary Identifier:  ? PAC:39239618
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2197 0.5kb upstream 0.5kb upstream 3021 true scaffold_3: 7957455-7960475 Capsella rubella
Carub.0003s2197 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 7957455-7957954 Capsella rubella
Carub.0003s2197 0.5kb downstream 0.5kb downstream 3021 true scaffold_3: 7957955-7960975 Capsella rubella
Carub.0003s2197 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 7960476-7960975 Capsella rubella
Carub.0003s2197 1.0kb upstream 1.0kb upstream 3521 true scaffold_3: 7956955-7960475 Capsella rubella
Carub.0003s2197 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 7956955-7957954 Capsella rubella
Carub.0003s2197 1.0kb downstream 1.0kb downstream 3521 true scaffold_3: 7957955-7961475 Capsella rubella
Carub.0003s2197 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 7960476-7961475 Capsella rubella
Carub.0003s2197 2.0kb upstream 2.0kb upstream 4521 true scaffold_3: 7955955-7960475 Capsella rubella
Carub.0003s2197 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 7955955-7957954 Capsella rubella
Carub.0003s2197 2.0kb downstream 2.0kb downstream 4521 true scaffold_3: 7957955-7962475 Capsella rubella
Carub.0003s2197 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 7960476-7962475 Capsella rubella
Carub.0003s2197 5.0kb upstream 5.0kb upstream 7521 true scaffold_3: 7952955-7960475 Capsella rubella
Carub.0003s2197 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 7952955-7957954 Capsella rubella
Carub.0003s2197 5.0kb downstream 5.0kb downstream 7521 true scaffold_3: 7957955-7965475 Capsella rubella
Carub.0003s2197 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 7960476-7965475 Capsella rubella
Carub.0003s2197 10.0kb upstream 10.0kb upstream 12521 true scaffold_3: 7947955-7960475 Capsella rubella
Carub.0003s2197 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 7947955-7957954 Capsella rubella
Carub.0003s2197 10.0kb downstream 10.0kb downstream 12521 true scaffold_3: 7957955-7970475 Capsella rubella
Carub.0003s2197 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 7960476-7970475 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344021 5261 Brassicaceae View MSA
123838038 5264 Brassicales-Malvales View MSA
124338058 5266 SBM View MSA
124237125 5268 Malvidae View MSA
124064758 5270 Rosid View MSA
123742167 5271 Pentapetalae View MSA
122792514 5272 Eudicot View MSA
122048571 5273 Angiosperm View MSA
121350591 5274 Embryophyte View MSA
123381812 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain