Gene : Carub.0003s2089 C. rubella v1.1
Defline:  (1 of 2) PTHR12632//PTHR12632:SF14 - TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED Genomic Order:  2089
Name:  ? Carub.0003s2089 Secondary Identifier:  ? PAC:39242633
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2089 0.5kb upstream 0.5kb upstream 2752 true scaffold_3: 7514485-7517236 Capsella rubella
Carub.0003s2089 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 7514485-7514984 Capsella rubella
Carub.0003s2089 0.5kb downstream 0.5kb downstream 2752 true scaffold_3: 7514985-7517736 Capsella rubella
Carub.0003s2089 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 7517237-7517736 Capsella rubella
Carub.0003s2089 1.0kb upstream 1.0kb upstream 3252 true scaffold_3: 7513985-7517236 Capsella rubella
Carub.0003s2089 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 7513985-7514984 Capsella rubella
Carub.0003s2089 1.0kb downstream 1.0kb downstream 3252 true scaffold_3: 7514985-7518236 Capsella rubella
Carub.0003s2089 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 7517237-7518236 Capsella rubella
Carub.0003s2089 2.0kb upstream 2.0kb upstream 4252 true scaffold_3: 7512985-7517236 Capsella rubella
Carub.0003s2089 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 7512985-7514984 Capsella rubella
Carub.0003s2089 2.0kb downstream 2.0kb downstream 4252 true scaffold_3: 7514985-7519236 Capsella rubella
Carub.0003s2089 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 7517237-7519236 Capsella rubella
Carub.0003s2089 5.0kb upstream 5.0kb upstream 7252 true scaffold_3: 7509985-7517236 Capsella rubella
Carub.0003s2089 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 7509985-7514984 Capsella rubella
Carub.0003s2089 5.0kb downstream 5.0kb downstream 7252 true scaffold_3: 7514985-7522236 Capsella rubella
Carub.0003s2089 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 7517237-7522236 Capsella rubella
Carub.0003s2089 10.0kb upstream 10.0kb upstream 12252 true scaffold_3: 7504985-7517236 Capsella rubella
Carub.0003s2089 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 7504985-7514984 Capsella rubella
Carub.0003s2089 10.0kb downstream 10.0kb downstream 12252 true scaffold_3: 7514985-7527236 Capsella rubella
Carub.0003s2089 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 7517237-7527236 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369478 5261 Brassicaceae View MSA
123799785 5264 Brassicales-Malvales View MSA
124297271 5266 SBM View MSA
124149206 5268 Malvidae View MSA
124064408 5270 Rosid View MSA
123744202 5271 Pentapetalae View MSA
122796368 5272 Eudicot View MSA
122043560 5273 Angiosperm View MSA
121349728 5274 Embryophyte View MSA
123424382 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain