Gene : Carub.0003s2372 C. rubella v1.1
Defline:  (1 of 1) 4.2.1.104 - Cyanase / Cyanate lyase Genomic Order:  2372
Name:  ? Carub.0003s2372 Secondary Identifier:  ? PAC:39241252
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella CYANCAT-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2372 0.5kb upstream 0.5kb upstream 1914 true scaffold_3: 8667414-8669327 Capsella rubella
Carub.0003s2372 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 8668828-8669327 Capsella rubella
Carub.0003s2372 0.5kb downstream 0.5kb downstream 1914 true scaffold_3: 8666914-8668827 Capsella rubella
Carub.0003s2372 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 8666914-8667413 Capsella rubella
Carub.0003s2372 1.0kb upstream 1.0kb upstream 2414 true scaffold_3: 8667414-8669827 Capsella rubella
Carub.0003s2372 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 8668828-8669827 Capsella rubella
Carub.0003s2372 1.0kb downstream 1.0kb downstream 2414 true scaffold_3: 8666414-8668827 Capsella rubella
Carub.0003s2372 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 8666414-8667413 Capsella rubella
Carub.0003s2372 2.0kb upstream 2.0kb upstream 3414 true scaffold_3: 8667414-8670827 Capsella rubella
Carub.0003s2372 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 8668828-8670827 Capsella rubella
Carub.0003s2372 2.0kb downstream 2.0kb downstream 3414 true scaffold_3: 8665414-8668827 Capsella rubella
Carub.0003s2372 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 8665414-8667413 Capsella rubella
Carub.0003s2372 5.0kb upstream 5.0kb upstream 6414 true scaffold_3: 8667414-8673827 Capsella rubella
Carub.0003s2372 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 8668828-8673827 Capsella rubella
Carub.0003s2372 5.0kb downstream 5.0kb downstream 6414 true scaffold_3: 8662414-8668827 Capsella rubella
Carub.0003s2372 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 8662414-8667413 Capsella rubella
Carub.0003s2372 10.0kb upstream 10.0kb upstream 11414 true scaffold_3: 8667414-8678827 Capsella rubella
Carub.0003s2372 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 8668828-8678827 Capsella rubella
Carub.0003s2372 10.0kb downstream 10.0kb downstream 11414 true scaffold_3: 8657414-8668827 Capsella rubella
Carub.0003s2372 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 8657414-8667413 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365715 5261 Brassicaceae View MSA
123835069 5264 Brassicales-Malvales View MSA
124343654 5266 SBM View MSA
124237057 5268 Malvidae View MSA
124061762 5270 Rosid View MSA
123751586 5271 Pentapetalae View MSA
122788870 5272 Eudicot View MSA
122044092 5273 Angiosperm View MSA
121346381 5274 Embryophyte View MSA
123424096 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain