Gene : Carub.0003s2392 C. rubella v1.1

Defline:  (1 of 5) PTHR33286:SF1 - BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED Genomic Order:  2392
Name:  ? Carub.0003s2392 Secondary Identifier:  ? PAC:39240233

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2392 0.5kb upstream 0.5kb upstream 999 true scaffold_3: 8755887-8756885 Capsella rubella
Carub.0003s2392 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 8756386-8756885 Capsella rubella
Carub.0003s2392 0.5kb downstream 0.5kb downstream 999 true scaffold_3: 8755387-8756385 Capsella rubella
Carub.0003s2392 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 8755387-8755886 Capsella rubella
Carub.0003s2392 1.0kb upstream 1.0kb upstream 1499 true scaffold_3: 8755887-8757385 Capsella rubella
Carub.0003s2392 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 8756386-8757385 Capsella rubella
Carub.0003s2392 1.0kb downstream 1.0kb downstream 1499 true scaffold_3: 8754887-8756385 Capsella rubella
Carub.0003s2392 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 8754887-8755886 Capsella rubella
Carub.0003s2392 2.0kb upstream 2.0kb upstream 2499 true scaffold_3: 8755887-8758385 Capsella rubella
Carub.0003s2392 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 8756386-8758385 Capsella rubella
Carub.0003s2392 2.0kb downstream 2.0kb downstream 2499 true scaffold_3: 8753887-8756385 Capsella rubella
Carub.0003s2392 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 8753887-8755886 Capsella rubella
Carub.0003s2392 5.0kb upstream 5.0kb upstream 5499 true scaffold_3: 8755887-8761385 Capsella rubella
Carub.0003s2392 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 8756386-8761385 Capsella rubella
Carub.0003s2392 5.0kb downstream 5.0kb downstream 5499 true scaffold_3: 8750887-8756385 Capsella rubella
Carub.0003s2392 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 8750887-8755886 Capsella rubella
Carub.0003s2392 10.0kb upstream 10.0kb upstream 10499 true scaffold_3: 8755887-8766385 Capsella rubella
Carub.0003s2392 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 8756386-8766385 Capsella rubella
Carub.0003s2392 10.0kb downstream 10.0kb downstream 10499 true scaffold_3: 8745887-8756385 Capsella rubella
Carub.0003s2392 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 8745887-8755886 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379298 5261 Brassicaceae View MSA
123802197 5264 Brassicales-Malvales View MSA
124299411 5266 SBM View MSA
124150830 5268 Malvidae View MSA
123876379 5270 Rosid View MSA
123460061 5271 Pentapetalae View MSA
122495441 5272 Eudicot View MSA
122051357 5273 Angiosperm View MSA
121351204 5274 Embryophyte View MSA
123382050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain