Gene : Carub.0003s2412 C. rubella v1.1
Defline:  (1 of 2) 3.3.1.1 - Adenosylhomocysteinase / SAHase Genomic Order:  2412
Name:  ? Carub.0003s2412 Secondary Identifier:  ? PAC:39239543
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5041 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2412 0.5kb upstream 0.5kb upstream 2461 true scaffold_3: 8854548-8857008 Capsella rubella
Carub.0003s2412 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 8856509-8857008 Capsella rubella
Carub.0003s2412 0.5kb downstream 0.5kb downstream 2461 true scaffold_3: 8854048-8856508 Capsella rubella
Carub.0003s2412 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 8854048-8854547 Capsella rubella
Carub.0003s2412 1.0kb upstream 1.0kb upstream 2961 true scaffold_3: 8854548-8857508 Capsella rubella
Carub.0003s2412 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 8856509-8857508 Capsella rubella
Carub.0003s2412 1.0kb downstream 1.0kb downstream 2961 true scaffold_3: 8853548-8856508 Capsella rubella
Carub.0003s2412 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 8853548-8854547 Capsella rubella
Carub.0003s2412 2.0kb upstream 2.0kb upstream 3961 true scaffold_3: 8854548-8858508 Capsella rubella
Carub.0003s2412 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 8856509-8858508 Capsella rubella
Carub.0003s2412 2.0kb downstream 2.0kb downstream 3961 true scaffold_3: 8852548-8856508 Capsella rubella
Carub.0003s2412 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 8852548-8854547 Capsella rubella
Carub.0003s2412 5.0kb upstream 5.0kb upstream 6961 true scaffold_3: 8854548-8861508 Capsella rubella
Carub.0003s2412 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 8856509-8861508 Capsella rubella
Carub.0003s2412 5.0kb downstream 5.0kb downstream 6961 true scaffold_3: 8849548-8856508 Capsella rubella
Carub.0003s2412 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 8849548-8854547 Capsella rubella
Carub.0003s2412 10.0kb upstream 10.0kb upstream 11961 true scaffold_3: 8854548-8866508 Capsella rubella
Carub.0003s2412 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 8856509-8866508 Capsella rubella
Carub.0003s2412 10.0kb downstream 10.0kb downstream 11961 true scaffold_3: 8844548-8856508 Capsella rubella
Carub.0003s2412 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 8844548-8854547 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378421 5261 Brassicaceae View MSA
123841205 5264 Brassicales-Malvales View MSA
124336884 5266 SBM View MSA
124236827 5268 Malvidae View MSA
124064572 5270 Rosid View MSA
123742592 5271 Pentapetalae View MSA
122797257 5272 Eudicot View MSA
122045256 5273 Angiosperm View MSA
121344239 5274 Embryophyte View MSA
123424541 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain