Gene : Carub.0003s2419 C. rubella v1.1

Defline:  (1 of 1) K03164 - DNA topoisomerase II [EC:5.99.1.3] (TOP2) Genomic Order:  2419
Name:  ? Carub.0003s2419 Secondary Identifier:  ? PAC:39242655

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2419 0.5kb upstream 0.5kb upstream 5996 true scaffold_3: 8896757-8902752 Capsella rubella
Carub.0003s2419 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 8896757-8897256 Capsella rubella
Carub.0003s2419 0.5kb downstream 0.5kb downstream 5996 true scaffold_3: 8897257-8903252 Capsella rubella
Carub.0003s2419 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 8902753-8903252 Capsella rubella
Carub.0003s2419 1.0kb upstream 1.0kb upstream 6496 true scaffold_3: 8896257-8902752 Capsella rubella
Carub.0003s2419 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 8896257-8897256 Capsella rubella
Carub.0003s2419 1.0kb downstream 1.0kb downstream 6496 true scaffold_3: 8897257-8903752 Capsella rubella
Carub.0003s2419 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 8902753-8903752 Capsella rubella
Carub.0003s2419 2.0kb upstream 2.0kb upstream 7496 true scaffold_3: 8895257-8902752 Capsella rubella
Carub.0003s2419 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 8895257-8897256 Capsella rubella
Carub.0003s2419 2.0kb downstream 2.0kb downstream 7496 true scaffold_3: 8897257-8904752 Capsella rubella
Carub.0003s2419 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 8902753-8904752 Capsella rubella
Carub.0003s2419 5.0kb upstream 5.0kb upstream 10496 true scaffold_3: 8892257-8902752 Capsella rubella
Carub.0003s2419 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 8892257-8897256 Capsella rubella
Carub.0003s2419 5.0kb downstream 5.0kb downstream 10496 true scaffold_3: 8897257-8907752 Capsella rubella
Carub.0003s2419 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 8902753-8907752 Capsella rubella
Carub.0003s2419 10.0kb upstream 10.0kb upstream 15496 true scaffold_3: 8887257-8902752 Capsella rubella
Carub.0003s2419 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 8887257-8897256 Capsella rubella
Carub.0003s2419 10.0kb downstream 10.0kb downstream 15496 true scaffold_3: 8897257-8912752 Capsella rubella
Carub.0003s2419 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 8902753-8912752 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375375 5261 Brassicaceae View MSA
123832805 5264 Brassicales-Malvales View MSA
124337042 5266 SBM View MSA
124238785 5268 Malvidae View MSA
124064018 5270 Rosid View MSA
123736481 5271 Pentapetalae View MSA
122791740 5272 Eudicot View MSA
122046291 5273 Angiosperm View MSA
121345151 5274 Embryophyte View MSA
123423865 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain