Gene : Carub.0003s2063 C. rubella v1.1

Defline:  (1 of 2) K00565 - mRNA (guanine-N7-)-methyltransferase (RNMT) Genomic Order:  2063
Name:  ? Carub.0003s2063 Secondary Identifier:  ? PAC:39240287

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2063 0.5kb upstream 0.5kb upstream 4051 true scaffold_3: 7406546-7410596 Capsella rubella
Carub.0003s2063 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 7410097-7410596 Capsella rubella
Carub.0003s2063 0.5kb downstream 0.5kb downstream 4051 true scaffold_3: 7406046-7410096 Capsella rubella
Carub.0003s2063 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 7406046-7406545 Capsella rubella
Carub.0003s2063 1.0kb upstream 1.0kb upstream 4551 true scaffold_3: 7406546-7411096 Capsella rubella
Carub.0003s2063 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 7410097-7411096 Capsella rubella
Carub.0003s2063 1.0kb downstream 1.0kb downstream 4551 true scaffold_3: 7405546-7410096 Capsella rubella
Carub.0003s2063 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 7405546-7406545 Capsella rubella
Carub.0003s2063 2.0kb upstream 2.0kb upstream 5551 true scaffold_3: 7406546-7412096 Capsella rubella
Carub.0003s2063 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 7410097-7412096 Capsella rubella
Carub.0003s2063 2.0kb downstream 2.0kb downstream 5551 true scaffold_3: 7404546-7410096 Capsella rubella
Carub.0003s2063 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 7404546-7406545 Capsella rubella
Carub.0003s2063 5.0kb upstream 5.0kb upstream 8551 true scaffold_3: 7406546-7415096 Capsella rubella
Carub.0003s2063 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 7410097-7415096 Capsella rubella
Carub.0003s2063 5.0kb downstream 5.0kb downstream 8551 true scaffold_3: 7401546-7410096 Capsella rubella
Carub.0003s2063 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 7401546-7406545 Capsella rubella
Carub.0003s2063 10.0kb upstream 10.0kb upstream 13551 true scaffold_3: 7406546-7420096 Capsella rubella
Carub.0003s2063 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 7410097-7420096 Capsella rubella
Carub.0003s2063 10.0kb downstream 10.0kb downstream 13551 true scaffold_3: 7396546-7410096 Capsella rubella
Carub.0003s2063 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 7396546-7406545 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362349 5261 Brassicaceae View MSA
123829264 5264 Brassicales-Malvales View MSA
124340033 5266 SBM View MSA
124240161 5268 Malvidae View MSA
124060648 5270 Rosid View MSA
123738979 5271 Pentapetalae View MSA
122793076 5272 Eudicot View MSA
122041775 5273 Angiosperm View MSA
121344632 5274 Embryophyte View MSA
123428419 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain