Gene : Carub.0003s2064 C. rubella v1.1

Defline:  (1 of 1) K08202 - MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5 (SLC22A4_5, OCTN) Genomic Order:  2064
Name:  ? Carub.0003s2064 Secondary Identifier:  ? PAC:39241320

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2064 0.5kb upstream 0.5kb upstream 3920 true scaffold_3: 7410549-7414468 Capsella rubella
Carub.0003s2064 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 7413969-7414468 Capsella rubella
Carub.0003s2064 0.5kb downstream 0.5kb downstream 3920 true scaffold_3: 7410049-7413968 Capsella rubella
Carub.0003s2064 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 7410049-7410548 Capsella rubella
Carub.0003s2064 1.0kb upstream 1.0kb upstream 4420 true scaffold_3: 7410549-7414968 Capsella rubella
Carub.0003s2064 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 7413969-7414968 Capsella rubella
Carub.0003s2064 1.0kb downstream 1.0kb downstream 4420 true scaffold_3: 7409549-7413968 Capsella rubella
Carub.0003s2064 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 7409549-7410548 Capsella rubella
Carub.0003s2064 2.0kb upstream 2.0kb upstream 5420 true scaffold_3: 7410549-7415968 Capsella rubella
Carub.0003s2064 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 7413969-7415968 Capsella rubella
Carub.0003s2064 2.0kb downstream 2.0kb downstream 5420 true scaffold_3: 7408549-7413968 Capsella rubella
Carub.0003s2064 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 7408549-7410548 Capsella rubella
Carub.0003s2064 5.0kb upstream 5.0kb upstream 8420 true scaffold_3: 7410549-7418968 Capsella rubella
Carub.0003s2064 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 7413969-7418968 Capsella rubella
Carub.0003s2064 5.0kb downstream 5.0kb downstream 8420 true scaffold_3: 7405549-7413968 Capsella rubella
Carub.0003s2064 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 7405549-7410548 Capsella rubella
Carub.0003s2064 10.0kb upstream 10.0kb upstream 13420 true scaffold_3: 7410549-7423968 Capsella rubella
Carub.0003s2064 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 7413969-7423968 Capsella rubella
Carub.0003s2064 10.0kb downstream 10.0kb downstream 13420 true scaffold_3: 7400549-7413968 Capsella rubella
Carub.0003s2064 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 7400549-7410548 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369210 5261 Brassicaceae View MSA
123838444 5264 Brassicales-Malvales View MSA
124341471 5266 SBM View MSA
124240429 5268 Malvidae View MSA
124068982 5270 Rosid View MSA
123739056 5271 Pentapetalae View MSA
122792351 5272 Eudicot View MSA
122045653 5273 Angiosperm View MSA
123429172 5275 Viridiplantae View MSA
121351070 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain