Gene : Carub.0003s1884 C. rubella v1.1
Defline:  (1 of 1) 1.14.11.32//1.14.11.9 - Codeine 3-O-demethylase / Codeine O-demethylase // Flavanone 3-dioxygenase / Naringenin,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating) Genomic Order:  1884
Name:  ? Carub.0003s1884 Secondary Identifier:  ? PAC:39242251
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY1F-823 Capsella rubella pathologic  
Crubella PWY1F-FLAVSYN Capsella rubella pathologic  
Crubella PWY-5059 Capsella rubella pathologic  
Crubella PWY-5152 Capsella rubella pathologic  
Crubella PWY-6787 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1884 0.5kb upstream 0.5kb upstream 2301 true scaffold_3: 6696265-6698565 Capsella rubella
Carub.0003s1884 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 6698066-6698565 Capsella rubella
Carub.0003s1884 0.5kb downstream 0.5kb downstream 2301 true scaffold_3: 6695765-6698065 Capsella rubella
Carub.0003s1884 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 6695765-6696264 Capsella rubella
Carub.0003s1884 1.0kb upstream 1.0kb upstream 2801 true scaffold_3: 6696265-6699065 Capsella rubella
Carub.0003s1884 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 6698066-6699065 Capsella rubella
Carub.0003s1884 1.0kb downstream 1.0kb downstream 2801 true scaffold_3: 6695265-6698065 Capsella rubella
Carub.0003s1884 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 6695265-6696264 Capsella rubella
Carub.0003s1884 2.0kb upstream 2.0kb upstream 3801 true scaffold_3: 6696265-6700065 Capsella rubella
Carub.0003s1884 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 6698066-6700065 Capsella rubella
Carub.0003s1884 2.0kb downstream 2.0kb downstream 3801 true scaffold_3: 6694265-6698065 Capsella rubella
Carub.0003s1884 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 6694265-6696264 Capsella rubella
Carub.0003s1884 5.0kb upstream 5.0kb upstream 6801 true scaffold_3: 6696265-6703065 Capsella rubella
Carub.0003s1884 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 6698066-6703065 Capsella rubella
Carub.0003s1884 5.0kb downstream 5.0kb downstream 6801 true scaffold_3: 6691265-6698065 Capsella rubella
Carub.0003s1884 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 6691265-6696264 Capsella rubella
Carub.0003s1884 10.0kb upstream 10.0kb upstream 11801 true scaffold_3: 6696265-6708065 Capsella rubella
Carub.0003s1884 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 6698066-6708065 Capsella rubella
Carub.0003s1884 10.0kb downstream 10.0kb downstream 11801 true scaffold_3: 6686265-6698065 Capsella rubella
Carub.0003s1884 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 6686265-6696264 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360730 5261 Brassicaceae View MSA
123840503 5264 Brassicales-Malvales View MSA
124351473 5266 SBM View MSA
124247576 5268 Malvidae View MSA
124074691 5270 Rosid View MSA
123748352 5271 Pentapetalae View MSA
122795529 5272 Eudicot View MSA
122043362 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121349353 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain