Gene : Carub.0003s1940 C. rubella v1.1
Defline:  (1 of 81) PTHR32133//PTHR32133:SF120 - FAMILY NOT NAMED // F-BOX ASSOCIATED UBIQUITINATION EFFECTOR FAMILY PROTEIN-RELATED Genomic Order:  1940
Name:  ? Carub.0003s1940 Secondary Identifier:  ? PAC:39241939
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1940 0.5kb upstream 0.5kb upstream 1580 true scaffold_3: 6963686-6965265 Capsella rubella
Carub.0003s1940 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 6963686-6964185 Capsella rubella
Carub.0003s1940 0.5kb downstream 0.5kb downstream 1580 true scaffold_3: 6964186-6965765 Capsella rubella
Carub.0003s1940 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 6965266-6965765 Capsella rubella
Carub.0003s1940 1.0kb upstream 1.0kb upstream 2080 true scaffold_3: 6963186-6965265 Capsella rubella
Carub.0003s1940 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 6963186-6964185 Capsella rubella
Carub.0003s1940 1.0kb downstream 1.0kb downstream 2080 true scaffold_3: 6964186-6966265 Capsella rubella
Carub.0003s1940 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 6965266-6966265 Capsella rubella
Carub.0003s1940 2.0kb upstream 2.0kb upstream 3080 true scaffold_3: 6962186-6965265 Capsella rubella
Carub.0003s1940 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 6962186-6964185 Capsella rubella
Carub.0003s1940 2.0kb downstream 2.0kb downstream 3080 true scaffold_3: 6964186-6967265 Capsella rubella
Carub.0003s1940 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 6965266-6967265 Capsella rubella
Carub.0003s1940 5.0kb upstream 5.0kb upstream 6080 true scaffold_3: 6959186-6965265 Capsella rubella
Carub.0003s1940 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 6959186-6964185 Capsella rubella
Carub.0003s1940 5.0kb downstream 5.0kb downstream 6080 true scaffold_3: 6964186-6970265 Capsella rubella
Carub.0003s1940 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 6965266-6970265 Capsella rubella
Carub.0003s1940 10.0kb upstream 10.0kb upstream 11080 true scaffold_3: 6954186-6965265 Capsella rubella
Carub.0003s1940 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 6954186-6964185 Capsella rubella
Carub.0003s1940 10.0kb downstream 10.0kb downstream 11080 true scaffold_3: 6964186-6975265 Capsella rubella
Carub.0003s1940 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 6965266-6975265 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381171 5261 Brassicaceae View MSA
123803097 5264 Brassicales-Malvales View MSA
124300232 5266 SBM View MSA
124254638 5268 Malvidae View MSA
124074667 5270 Rosid View MSA
123753263 5271 Pentapetalae View MSA
122797953 5272 Eudicot View MSA
122051694 5273 Angiosperm View MSA
121351156 5274 Embryophyte View MSA
123382030 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain