Gene : Carub.0003s2159 C. rubella v1.1
Defline:  (1 of 2) PTHR31621//PTHR31621:SF1 - FAMILY NOT NAMED // DUF679 DOMAIN MEMBRANE PROTEIN 1 Genomic Order:  2159
Name:  ? Carub.0003s2159 Secondary Identifier:  ? PAC:39242912
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2159 0.5kb upstream 0.5kb upstream 1161 true scaffold_3: 7806162-7807322 Capsella rubella
Carub.0003s2159 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 7806823-7807322 Capsella rubella
Carub.0003s2159 0.5kb downstream 0.5kb downstream 1161 true scaffold_3: 7805662-7806822 Capsella rubella
Carub.0003s2159 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 7805662-7806161 Capsella rubella
Carub.0003s2159 1.0kb upstream 1.0kb upstream 1661 true scaffold_3: 7806162-7807822 Capsella rubella
Carub.0003s2159 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 7806823-7807822 Capsella rubella
Carub.0003s2159 1.0kb downstream 1.0kb downstream 1661 true scaffold_3: 7805162-7806822 Capsella rubella
Carub.0003s2159 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 7805162-7806161 Capsella rubella
Carub.0003s2159 2.0kb upstream 2.0kb upstream 2661 true scaffold_3: 7806162-7808822 Capsella rubella
Carub.0003s2159 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 7806823-7808822 Capsella rubella
Carub.0003s2159 2.0kb downstream 2.0kb downstream 2661 true scaffold_3: 7804162-7806822 Capsella rubella
Carub.0003s2159 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 7804162-7806161 Capsella rubella
Carub.0003s2159 5.0kb upstream 5.0kb upstream 5661 true scaffold_3: 7806162-7811822 Capsella rubella
Carub.0003s2159 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 7806823-7811822 Capsella rubella
Carub.0003s2159 5.0kb downstream 5.0kb downstream 5661 true scaffold_3: 7801162-7806822 Capsella rubella
Carub.0003s2159 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 7801162-7806161 Capsella rubella
Carub.0003s2159 10.0kb upstream 10.0kb upstream 10661 true scaffold_3: 7806162-7816822 Capsella rubella
Carub.0003s2159 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 7806823-7816822 Capsella rubella
Carub.0003s2159 10.0kb downstream 10.0kb downstream 10661 true scaffold_3: 7796162-7806822 Capsella rubella
Carub.0003s2159 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 7796162-7806161 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367765 5261 Brassicaceae View MSA
123840032 5264 Brassicales-Malvales View MSA
124349774 5266 SBM View MSA
124249306 5268 Malvidae View MSA
124066141 5270 Rosid View MSA
123749826 5271 Pentapetalae View MSA
122795559 5272 Eudicot View MSA
122046671 5273 Angiosperm View MSA
121349168 5274 Embryophyte View MSA
123426818 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain