Gene : Carub.0003s2464 C. rubella v1.1

Defline:  (1 of 2) PTHR10641//PTHR10641:SF539 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB-LIKE DNA-BINDING DOMAIN PROTEIN Genomic Order:  2464
Name:  ? Carub.0003s2464 Secondary Identifier:  ? PAC:39241492

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2464 0.5kb upstream 0.5kb upstream 1443 true scaffold_3: 9096743-9098185 Capsella rubella
Carub.0003s2464 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 9097686-9098185 Capsella rubella
Carub.0003s2464 0.5kb downstream 0.5kb downstream 1443 true scaffold_3: 9096243-9097685 Capsella rubella
Carub.0003s2464 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 9096243-9096742 Capsella rubella
Carub.0003s2464 1.0kb upstream 1.0kb upstream 1943 true scaffold_3: 9096743-9098685 Capsella rubella
Carub.0003s2464 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 9097686-9098685 Capsella rubella
Carub.0003s2464 1.0kb downstream 1.0kb downstream 1943 true scaffold_3: 9095743-9097685 Capsella rubella
Carub.0003s2464 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 9095743-9096742 Capsella rubella
Carub.0003s2464 2.0kb upstream 2.0kb upstream 2943 true scaffold_3: 9096743-9099685 Capsella rubella
Carub.0003s2464 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 9097686-9099685 Capsella rubella
Carub.0003s2464 2.0kb downstream 2.0kb downstream 2943 true scaffold_3: 9094743-9097685 Capsella rubella
Carub.0003s2464 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 9094743-9096742 Capsella rubella
Carub.0003s2464 5.0kb upstream 5.0kb upstream 5943 true scaffold_3: 9096743-9102685 Capsella rubella
Carub.0003s2464 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 9097686-9102685 Capsella rubella
Carub.0003s2464 5.0kb downstream 5.0kb downstream 5943 true scaffold_3: 9091743-9097685 Capsella rubella
Carub.0003s2464 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 9091743-9096742 Capsella rubella
Carub.0003s2464 10.0kb upstream 10.0kb upstream 10943 true scaffold_3: 9096743-9107685 Capsella rubella
Carub.0003s2464 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 9097686-9107685 Capsella rubella
Carub.0003s2464 10.0kb downstream 10.0kb downstream 10943 true scaffold_3: 9086743-9097685 Capsella rubella
Carub.0003s2464 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 9086743-9096742 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043277 5273 Angiosperm View MSA
122368195 5261 Brassicaceae View MSA
123839821 5264 Brassicales-Malvales View MSA
124337332 5266 SBM View MSA
124253161 5268 Malvidae View MSA
124064030 5270 Rosid View MSA
123744070 5271 Pentapetalae View MSA
122796745 5272 Eudicot View MSA
123429079 5275 Viridiplantae View MSA
121310099 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain