Gene : Carub.0003s2472 C. rubella v1.1

Defline:  (1 of 1) PTHR10992//PTHR10992:SF841 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2472
Name:  ? Carub.0003s2472 Secondary Identifier:  ? PAC:39241370

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2472 0.5kb upstream 0.5kb upstream 2050 true scaffold_3: 9147300-9149349 Capsella rubella
Carub.0003s2472 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 9148850-9149349 Capsella rubella
Carub.0003s2472 0.5kb downstream 0.5kb downstream 2050 true scaffold_3: 9146800-9148849 Capsella rubella
Carub.0003s2472 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 9146800-9147299 Capsella rubella
Carub.0003s2472 1.0kb upstream 1.0kb upstream 2550 true scaffold_3: 9147300-9149849 Capsella rubella
Carub.0003s2472 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 9148850-9149849 Capsella rubella
Carub.0003s2472 1.0kb downstream 1.0kb downstream 2550 true scaffold_3: 9146300-9148849 Capsella rubella
Carub.0003s2472 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 9146300-9147299 Capsella rubella
Carub.0003s2472 2.0kb upstream 2.0kb upstream 3550 true scaffold_3: 9147300-9150849 Capsella rubella
Carub.0003s2472 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 9148850-9150849 Capsella rubella
Carub.0003s2472 2.0kb downstream 2.0kb downstream 3550 true scaffold_3: 9145300-9148849 Capsella rubella
Carub.0003s2472 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 9145300-9147299 Capsella rubella
Carub.0003s2472 5.0kb upstream 5.0kb upstream 6550 true scaffold_3: 9147300-9153849 Capsella rubella
Carub.0003s2472 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 9148850-9153849 Capsella rubella
Carub.0003s2472 5.0kb downstream 5.0kb downstream 6550 true scaffold_3: 9142300-9148849 Capsella rubella
Carub.0003s2472 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 9142300-9147299 Capsella rubella
Carub.0003s2472 10.0kb upstream 10.0kb upstream 11550 true scaffold_3: 9147300-9158849 Capsella rubella
Carub.0003s2472 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 9148850-9158849 Capsella rubella
Carub.0003s2472 10.0kb downstream 10.0kb downstream 11550 true scaffold_3: 9137300-9148849 Capsella rubella
Carub.0003s2472 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 9137300-9147299 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122336138 5261 Brassicaceae Singleton cluster - no MSA
123776868 5264 Brassicales-Malvales Singleton cluster - no MSA
124275250 5266 SBM Singleton cluster - no MSA
124130650 5268 Malvidae Singleton cluster - no MSA
124042475 5270 Rosid View MSA
123750652 5271 Pentapetalae View MSA
122793074 5272 Eudicot View MSA
122048522 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121350361 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain