Gene : Carub.0003s1987 C. rubella v1.1
Defline:  (1 of 1) PTHR12265:SF0 - TRANSMEMBRANE PROTEIN 53 Genomic Order:  1987
Name:  ? Carub.0003s1987 Secondary Identifier:  ? PAC:39242440
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1987 0.5kb upstream 0.5kb upstream 2683 true scaffold_3: 7141275-7143957 Capsella rubella
Carub.0003s1987 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 7141275-7141774 Capsella rubella
Carub.0003s1987 0.5kb downstream 0.5kb downstream 2683 true scaffold_3: 7141775-7144457 Capsella rubella
Carub.0003s1987 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 7143958-7144457 Capsella rubella
Carub.0003s1987 1.0kb upstream 1.0kb upstream 3183 true scaffold_3: 7140775-7143957 Capsella rubella
Carub.0003s1987 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 7140775-7141774 Capsella rubella
Carub.0003s1987 1.0kb downstream 1.0kb downstream 3183 true scaffold_3: 7141775-7144957 Capsella rubella
Carub.0003s1987 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 7143958-7144957 Capsella rubella
Carub.0003s1987 2.0kb upstream 2.0kb upstream 4183 true scaffold_3: 7139775-7143957 Capsella rubella
Carub.0003s1987 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 7139775-7141774 Capsella rubella
Carub.0003s1987 2.0kb downstream 2.0kb downstream 4183 true scaffold_3: 7141775-7145957 Capsella rubella
Carub.0003s1987 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 7143958-7145957 Capsella rubella
Carub.0003s1987 5.0kb upstream 5.0kb upstream 7183 true scaffold_3: 7136775-7143957 Capsella rubella
Carub.0003s1987 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 7136775-7141774 Capsella rubella
Carub.0003s1987 5.0kb downstream 5.0kb downstream 7183 true scaffold_3: 7141775-7148957 Capsella rubella
Carub.0003s1987 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 7143958-7148957 Capsella rubella
Carub.0003s1987 10.0kb upstream 10.0kb upstream 12183 true scaffold_3: 7131775-7143957 Capsella rubella
Carub.0003s1987 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 7131775-7141774 Capsella rubella
Carub.0003s1987 10.0kb downstream 10.0kb downstream 12183 true scaffold_3: 7141775-7153957 Capsella rubella
Carub.0003s1987 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 7143958-7153957 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378866 5261 Brassicaceae View MSA
123829588 5264 Brassicales-Malvales View MSA
124337285 5266 SBM View MSA
124237461 5268 Malvidae View MSA
124067477 5270 Rosid View MSA
123747198 5271 Pentapetalae View MSA
122786778 5272 Eudicot View MSA
122048979 5273 Angiosperm View MSA
121347494 5274 Embryophyte View MSA
123425038 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain