Gene : Carub.0003s1983 C. rubella v1.1
Defline:  (1 of 4) PTHR23500:SF47 - SUGAR TRANSPORT PROTEIN 10-RELATED Genomic Order:  1983
Name:  ? Carub.0003s1983 Secondary Identifier:  ? PAC:39239253
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1983 0.5kb upstream 0.5kb upstream 2945 true scaffold_3: 7117153-7120097 Capsella rubella
Carub.0003s1983 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 7117153-7117652 Capsella rubella
Carub.0003s1983 0.5kb downstream 0.5kb downstream 2945 true scaffold_3: 7117653-7120597 Capsella rubella
Carub.0003s1983 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 7120098-7120597 Capsella rubella
Carub.0003s1983 1.0kb upstream 1.0kb upstream 3445 true scaffold_3: 7116653-7120097 Capsella rubella
Carub.0003s1983 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 7116653-7117652 Capsella rubella
Carub.0003s1983 1.0kb downstream 1.0kb downstream 3445 true scaffold_3: 7117653-7121097 Capsella rubella
Carub.0003s1983 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 7120098-7121097 Capsella rubella
Carub.0003s1983 2.0kb upstream 2.0kb upstream 4445 true scaffold_3: 7115653-7120097 Capsella rubella
Carub.0003s1983 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 7115653-7117652 Capsella rubella
Carub.0003s1983 2.0kb downstream 2.0kb downstream 4445 true scaffold_3: 7117653-7122097 Capsella rubella
Carub.0003s1983 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 7120098-7122097 Capsella rubella
Carub.0003s1983 5.0kb upstream 5.0kb upstream 7445 true scaffold_3: 7112653-7120097 Capsella rubella
Carub.0003s1983 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 7112653-7117652 Capsella rubella
Carub.0003s1983 5.0kb downstream 5.0kb downstream 7445 true scaffold_3: 7117653-7125097 Capsella rubella
Carub.0003s1983 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 7120098-7125097 Capsella rubella
Carub.0003s1983 10.0kb upstream 10.0kb upstream 12445 true scaffold_3: 7107653-7120097 Capsella rubella
Carub.0003s1983 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 7107653-7117652 Capsella rubella
Carub.0003s1983 10.0kb downstream 10.0kb downstream 12445 true scaffold_3: 7117653-7130097 Capsella rubella
Carub.0003s1983 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 7120098-7130097 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362938 5261 Brassicaceae View MSA
123842232 5264 Brassicales-Malvales View MSA
124323337 5266 SBM View MSA
124255361 5268 Malvidae View MSA
124040581 5270 Rosid View MSA
123747169 5271 Pentapetalae View MSA
122795547 5272 Eudicot View MSA
122051255 5273 Angiosperm View MSA
123429172 5275 Viridiplantae View MSA
121350723 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain