Gene : Carub.0003s1753 C. rubella v1.1
Defline:  (1 of 6) K01915 - glutamine synthetase (glnA, GLUL) Genomic Order:  1753
Name:  ? Carub.0003s1753 Secondary Identifier:  ? PAC:39241556
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella GLNSYN-PWY Capsella rubella pathologic  
Crubella PWY-3282 Capsella rubella pathologic  
Crubella PWY-381 Capsella rubella pathologic  
Crubella PWY-6549 Capsella rubella pathologic  
Crubella PWY-6963 Capsella rubella pathologic  
Crubella PWY-6964 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1753 0.5kb upstream 0.5kb upstream 2686 true scaffold_3: 6197898-6200583 Capsella rubella
Carub.0003s1753 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 6197898-6198397 Capsella rubella
Carub.0003s1753 0.5kb downstream 0.5kb downstream 2686 true scaffold_3: 6198398-6201083 Capsella rubella
Carub.0003s1753 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 6200584-6201083 Capsella rubella
Carub.0003s1753 1.0kb upstream 1.0kb upstream 3186 true scaffold_3: 6197398-6200583 Capsella rubella
Carub.0003s1753 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 6197398-6198397 Capsella rubella
Carub.0003s1753 1.0kb downstream 1.0kb downstream 3186 true scaffold_3: 6198398-6201583 Capsella rubella
Carub.0003s1753 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 6200584-6201583 Capsella rubella
Carub.0003s1753 2.0kb upstream 2.0kb upstream 4186 true scaffold_3: 6196398-6200583 Capsella rubella
Carub.0003s1753 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 6196398-6198397 Capsella rubella
Carub.0003s1753 2.0kb downstream 2.0kb downstream 4186 true scaffold_3: 6198398-6202583 Capsella rubella
Carub.0003s1753 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 6200584-6202583 Capsella rubella
Carub.0003s1753 5.0kb upstream 5.0kb upstream 7186 true scaffold_3: 6193398-6200583 Capsella rubella
Carub.0003s1753 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 6193398-6198397 Capsella rubella
Carub.0003s1753 5.0kb downstream 5.0kb downstream 7186 true scaffold_3: 6198398-6205583 Capsella rubella
Carub.0003s1753 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 6200584-6205583 Capsella rubella
Carub.0003s1753 10.0kb upstream 10.0kb upstream 12186 true scaffold_3: 6188398-6200583 Capsella rubella
Carub.0003s1753 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 6188398-6198397 Capsella rubella
Carub.0003s1753 10.0kb downstream 10.0kb downstream 12186 true scaffold_3: 6198398-6210583 Capsella rubella
Carub.0003s1753 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 6200584-6210583 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372915 5261 Brassicaceae View MSA
123800457 5264 Brassicales-Malvales View MSA
124297870 5266 SBM View MSA
124149654 5268 Malvidae View MSA
124072083 5270 Rosid View MSA
123746903 5271 Pentapetalae View MSA
122794697 5272 Eudicot View MSA
122048815 5273 Angiosperm View MSA
121347129 5274 Embryophyte View MSA
123428761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain