Gene : Carub.0003s1767 C. rubella v1.1
Defline:  (1 of 1) PTHR10091//PTHR10091:SF8 - ALDOSE-1-EPIMERASE // SUBFAMILY NOT NAMED Genomic Order:  1767
Name:  ? Carub.0003s1767 Secondary Identifier:  ? PAC:39242716
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY66-422 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1767 0.5kb upstream 0.5kb upstream 2390 true scaffold_3: 6257999-6260388 Capsella rubella
Carub.0003s1767 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 6259889-6260388 Capsella rubella
Carub.0003s1767 0.5kb downstream 0.5kb downstream 2390 true scaffold_3: 6257499-6259888 Capsella rubella
Carub.0003s1767 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 6257499-6257998 Capsella rubella
Carub.0003s1767 1.0kb upstream 1.0kb upstream 2890 true scaffold_3: 6257999-6260888 Capsella rubella
Carub.0003s1767 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 6259889-6260888 Capsella rubella
Carub.0003s1767 1.0kb downstream 1.0kb downstream 2890 true scaffold_3: 6256999-6259888 Capsella rubella
Carub.0003s1767 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 6256999-6257998 Capsella rubella
Carub.0003s1767 2.0kb upstream 2.0kb upstream 3890 true scaffold_3: 6257999-6261888 Capsella rubella
Carub.0003s1767 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 6259889-6261888 Capsella rubella
Carub.0003s1767 2.0kb downstream 2.0kb downstream 3890 true scaffold_3: 6255999-6259888 Capsella rubella
Carub.0003s1767 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 6255999-6257998 Capsella rubella
Carub.0003s1767 5.0kb upstream 5.0kb upstream 6890 true scaffold_3: 6257999-6264888 Capsella rubella
Carub.0003s1767 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 6259889-6264888 Capsella rubella
Carub.0003s1767 5.0kb downstream 5.0kb downstream 6890 true scaffold_3: 6252999-6259888 Capsella rubella
Carub.0003s1767 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 6252999-6257998 Capsella rubella
Carub.0003s1767 10.0kb upstream 10.0kb upstream 11890 true scaffold_3: 6257999-6269888 Capsella rubella
Carub.0003s1767 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 6259889-6269888 Capsella rubella
Carub.0003s1767 10.0kb downstream 10.0kb downstream 11890 true scaffold_3: 6247999-6259888 Capsella rubella
Carub.0003s1767 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 6247999-6257998 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368169 5261 Brassicaceae View MSA
123828040 5264 Brassicales-Malvales View MSA
124342660 5266 SBM View MSA
124251209 5268 Malvidae View MSA
124068882 5270 Rosid View MSA
123737067 5271 Pentapetalae View MSA
122789360 5272 Eudicot View MSA
122043649 5273 Angiosperm View MSA
121346493 5274 Embryophyte View MSA
123425845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain