Gene : Carub.0003s1824 C. rubella v1.1
Defline:  (1 of 1) K09313 - homeobox protein cut-like (CUTL) Genomic Order:  1824
Name:  ? Carub.0003s1824 Secondary Identifier:  ? PAC:39240653
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1824 0.5kb upstream 0.5kb upstream 5389 true scaffold_3: 6464034-6469422 Capsella rubella
Carub.0003s1824 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 6464034-6464533 Capsella rubella
Carub.0003s1824 0.5kb downstream 0.5kb downstream 5389 true scaffold_3: 6464534-6469922 Capsella rubella
Carub.0003s1824 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 6469423-6469922 Capsella rubella
Carub.0003s1824 1.0kb upstream 1.0kb upstream 5889 true scaffold_3: 6463534-6469422 Capsella rubella
Carub.0003s1824 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 6463534-6464533 Capsella rubella
Carub.0003s1824 1.0kb downstream 1.0kb downstream 5889 true scaffold_3: 6464534-6470422 Capsella rubella
Carub.0003s1824 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 6469423-6470422 Capsella rubella
Carub.0003s1824 2.0kb upstream 2.0kb upstream 6889 true scaffold_3: 6462534-6469422 Capsella rubella
Carub.0003s1824 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 6462534-6464533 Capsella rubella
Carub.0003s1824 2.0kb downstream 2.0kb downstream 6889 true scaffold_3: 6464534-6471422 Capsella rubella
Carub.0003s1824 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 6469423-6471422 Capsella rubella
Carub.0003s1824 5.0kb upstream 5.0kb upstream 9889 true scaffold_3: 6459534-6469422 Capsella rubella
Carub.0003s1824 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 6459534-6464533 Capsella rubella
Carub.0003s1824 5.0kb downstream 5.0kb downstream 9889 true scaffold_3: 6464534-6474422 Capsella rubella
Carub.0003s1824 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 6469423-6474422 Capsella rubella
Carub.0003s1824 10.0kb upstream 10.0kb upstream 14889 true scaffold_3: 6454534-6469422 Capsella rubella
Carub.0003s1824 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 6454534-6464533 Capsella rubella
Carub.0003s1824 10.0kb downstream 10.0kb downstream 14889 true scaffold_3: 6464534-6479422 Capsella rubella
Carub.0003s1824 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 6469423-6479422 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376841 5261 Brassicaceae View MSA
123833824 5264 Brassicales-Malvales View MSA
124344817 5266 SBM View MSA
124240585 5268 Malvidae View MSA
124062703 5270 Rosid View MSA
123746620 5271 Pentapetalae View MSA
122790206 5272 Eudicot View MSA
122042550 5273 Angiosperm View MSA
121344856 5274 Embryophyte View MSA
123425319 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain