Gene : Carub.0003s1604 C. rubella v1.1
Defline:  (1 of 1) PTHR23076:SF56 - AAA-TYPE ATPASE FAMILY PROTEIN Genomic Order:  1604
Name:  ? Carub.0003s1604 Secondary Identifier:  ? PAC:39241151
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1604 0.5kb upstream 0.5kb upstream 3820 true scaffold_3: 5653105-5656924 Capsella rubella
Carub.0003s1604 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 5656425-5656924 Capsella rubella
Carub.0003s1604 0.5kb downstream 0.5kb downstream 3820 true scaffold_3: 5652605-5656424 Capsella rubella
Carub.0003s1604 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 5652605-5653104 Capsella rubella
Carub.0003s1604 1.0kb upstream 1.0kb upstream 4320 true scaffold_3: 5653105-5657424 Capsella rubella
Carub.0003s1604 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 5656425-5657424 Capsella rubella
Carub.0003s1604 1.0kb downstream 1.0kb downstream 4320 true scaffold_3: 5652105-5656424 Capsella rubella
Carub.0003s1604 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 5652105-5653104 Capsella rubella
Carub.0003s1604 2.0kb upstream 2.0kb upstream 5320 true scaffold_3: 5653105-5658424 Capsella rubella
Carub.0003s1604 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 5656425-5658424 Capsella rubella
Carub.0003s1604 2.0kb downstream 2.0kb downstream 5320 true scaffold_3: 5651105-5656424 Capsella rubella
Carub.0003s1604 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 5651105-5653104 Capsella rubella
Carub.0003s1604 5.0kb upstream 5.0kb upstream 8320 true scaffold_3: 5653105-5661424 Capsella rubella
Carub.0003s1604 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 5656425-5661424 Capsella rubella
Carub.0003s1604 5.0kb downstream 5.0kb downstream 8320 true scaffold_3: 5648105-5656424 Capsella rubella
Carub.0003s1604 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 5648105-5653104 Capsella rubella
Carub.0003s1604 10.0kb upstream 10.0kb upstream 13320 true scaffold_3: 5653105-5666424 Capsella rubella
Carub.0003s1604 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 5656425-5666424 Capsella rubella
Carub.0003s1604 10.0kb downstream 10.0kb downstream 13320 true scaffold_3: 5643105-5656424 Capsella rubella
Carub.0003s1604 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 5643105-5653104 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122336111 5261 Brassicaceae Singleton cluster - no MSA
123841536 5264 Brassicales-Malvales View MSA
124341484 5266 SBM View MSA
124240074 5268 Malvidae View MSA
124063908 5270 Rosid View MSA
123740118 5271 Pentapetalae View MSA
122786988 5272 Eudicot View MSA
122046642 5273 Angiosperm View MSA
121346512 5274 Embryophyte View MSA
123425128 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain