Gene : Carub.0003s3394 C. rubella v1.1
Defline:  (1 of 1) PTHR12197//PTHR12197:SF138 - SET AND MYND DOMAIN CONTAINING // SET AND MYND DOMAIN-CONTAINING PROTEIN DDB_G0292140 Genomic Order:  3394
Name:  ? Carub.0003s3394 Secondary Identifier:  ? PAC:39241393
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3394 0.5kb upstream 0.5kb upstream 1927 true scaffold_3: 14394577-14396503 Capsella rubella
Carub.0003s3394 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 14394577-14395076 Capsella rubella
Carub.0003s3394 0.5kb downstream 0.5kb downstream 1927 true scaffold_3: 14395077-14397003 Capsella rubella
Carub.0003s3394 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 14396504-14397003 Capsella rubella
Carub.0003s3394 1.0kb upstream 1.0kb upstream 2427 true scaffold_3: 14394077-14396503 Capsella rubella
Carub.0003s3394 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 14394077-14395076 Capsella rubella
Carub.0003s3394 1.0kb downstream 1.0kb downstream 2427 true scaffold_3: 14395077-14397503 Capsella rubella
Carub.0003s3394 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 14396504-14397503 Capsella rubella
Carub.0003s3394 2.0kb upstream 2.0kb upstream 3427 true scaffold_3: 14393077-14396503 Capsella rubella
Carub.0003s3394 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 14393077-14395076 Capsella rubella
Carub.0003s3394 2.0kb downstream 2.0kb downstream 3427 true scaffold_3: 14395077-14398503 Capsella rubella
Carub.0003s3394 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 14396504-14398503 Capsella rubella
Carub.0003s3394 5.0kb upstream 5.0kb upstream 6427 true scaffold_3: 14390077-14396503 Capsella rubella
Carub.0003s3394 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 14390077-14395076 Capsella rubella
Carub.0003s3394 5.0kb downstream 5.0kb downstream 6427 true scaffold_3: 14395077-14401503 Capsella rubella
Carub.0003s3394 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 14396504-14401503 Capsella rubella
Carub.0003s3394 10.0kb upstream 10.0kb upstream 11427 true scaffold_3: 14385077-14396503 Capsella rubella
Carub.0003s3394 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 14385077-14395076 Capsella rubella
Carub.0003s3394 10.0kb downstream 10.0kb downstream 11427 true scaffold_3: 14395077-14406503 Capsella rubella
Carub.0003s3394 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 14396504-14406503 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362655 5261 Brassicaceae View MSA
123829436 5264 Brassicales-Malvales View MSA
124336579 5266 SBM View MSA
124242467 5268 Malvidae View MSA
124065059 5270 Rosid View MSA
123739236 5271 Pentapetalae View MSA
122790735 5272 Eudicot View MSA
122047445 5273 Angiosperm View MSA
121345734 5274 Embryophyte View MSA
123425197 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain