Gene : Carub.0003s3410 C. rubella v1.1
Defline:  (1 of 2) K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) Genomic Order:  3410
Name:  ? Carub.0003s3410 Secondary Identifier:  ? PAC:39240195
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3410 0.5kb upstream 0.5kb upstream 2145 true scaffold_3: 14455091-14457235 Capsella rubella
Carub.0003s3410 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 14456736-14457235 Capsella rubella
Carub.0003s3410 0.5kb downstream 0.5kb downstream 2145 true scaffold_3: 14454591-14456735 Capsella rubella
Carub.0003s3410 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 14454591-14455090 Capsella rubella
Carub.0003s3410 1.0kb upstream 1.0kb upstream 2645 true scaffold_3: 14455091-14457735 Capsella rubella
Carub.0003s3410 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 14456736-14457735 Capsella rubella
Carub.0003s3410 1.0kb downstream 1.0kb downstream 2645 true scaffold_3: 14454091-14456735 Capsella rubella
Carub.0003s3410 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 14454091-14455090 Capsella rubella
Carub.0003s3410 2.0kb upstream 2.0kb upstream 3645 true scaffold_3: 14455091-14458735 Capsella rubella
Carub.0003s3410 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 14456736-14458735 Capsella rubella
Carub.0003s3410 2.0kb downstream 2.0kb downstream 3645 true scaffold_3: 14453091-14456735 Capsella rubella
Carub.0003s3410 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 14453091-14455090 Capsella rubella
Carub.0003s3410 5.0kb upstream 5.0kb upstream 6645 true scaffold_3: 14455091-14461735 Capsella rubella
Carub.0003s3410 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 14456736-14461735 Capsella rubella
Carub.0003s3410 5.0kb downstream 5.0kb downstream 6645 true scaffold_3: 14450091-14456735 Capsella rubella
Carub.0003s3410 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 14450091-14455090 Capsella rubella
Carub.0003s3410 10.0kb upstream 10.0kb upstream 11645 true scaffold_3: 14455091-14466735 Capsella rubella
Carub.0003s3410 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 14456736-14466735 Capsella rubella
Carub.0003s3410 10.0kb downstream 10.0kb downstream 11645 true scaffold_3: 14445091-14456735 Capsella rubella
Carub.0003s3410 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 14445091-14455090 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376846 5261 Brassicaceae View MSA
123801372 5264 Brassicales-Malvales View MSA
124298684 5266 SBM View MSA
124150271 5268 Malvidae View MSA
123875918 5270 Rosid View MSA
123459668 5271 Pentapetalae View MSA
122495057 5272 Eudicot View MSA
122048548 5273 Angiosperm View MSA
121350329 5274 Embryophyte View MSA
123426511 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain