Gene : Carub.0003s3468 C. rubella v1.1
Defline:  (1 of 5) 4.1.1.25 - Tyrosine decarboxylase / L-tyrosine carboxy-lyase Genomic Order:  3469
Name:  ? Carub.0003s3468 Secondary Identifier:  ? PAC:39241180
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6802 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3468 0.5kb upstream 0.5kb upstream 1588 true scaffold_3: 14741629-14743216 Capsella rubella
Carub.0003s3468 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 14741629-14742128 Capsella rubella
Carub.0003s3468 0.5kb downstream 0.5kb downstream 1588 true scaffold_3: 14742129-14743716 Capsella rubella
Carub.0003s3468 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 14743217-14743716 Capsella rubella
Carub.0003s3468 1.0kb upstream 1.0kb upstream 2088 true scaffold_3: 14741129-14743216 Capsella rubella
Carub.0003s3468 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 14741129-14742128 Capsella rubella
Carub.0003s3468 1.0kb downstream 1.0kb downstream 2088 true scaffold_3: 14742129-14744216 Capsella rubella
Carub.0003s3468 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 14743217-14744216 Capsella rubella
Carub.0003s3468 2.0kb upstream 2.0kb upstream 3088 true scaffold_3: 14740129-14743216 Capsella rubella
Carub.0003s3468 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 14740129-14742128 Capsella rubella
Carub.0003s3468 2.0kb downstream 2.0kb downstream 3088 true scaffold_3: 14742129-14745216 Capsella rubella
Carub.0003s3468 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 14743217-14745216 Capsella rubella
Carub.0003s3468 5.0kb upstream 5.0kb upstream 6088 true scaffold_3: 14737129-14743216 Capsella rubella
Carub.0003s3468 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 14737129-14742128 Capsella rubella
Carub.0003s3468 5.0kb downstream 5.0kb downstream 6088 true scaffold_3: 14742129-14748216 Capsella rubella
Carub.0003s3468 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 14743217-14748216 Capsella rubella
Carub.0003s3468 10.0kb upstream 10.0kb upstream 11088 true scaffold_3: 14732129-14743216 Capsella rubella
Carub.0003s3468 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 14732129-14742128 Capsella rubella
Carub.0003s3468 10.0kb downstream 10.0kb downstream 11088 true scaffold_3: 14742129-14753216 Capsella rubella
Carub.0003s3468 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 14743217-14753216 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122336114 5261 Brassicaceae Singleton cluster - no MSA
123776844 5264 Brassicales-Malvales Singleton cluster - no MSA
124275226 5266 SBM Singleton cluster - no MSA
124252730 5268 Malvidae View MSA
124074916 5270 Rosid View MSA
123752986 5271 Pentapetalae View MSA
122774900 5272 Eudicot View MSA
122049990 5273 Angiosperm View MSA
121346874 5274 Embryophyte View MSA
123423954 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain