Gene : Carub.0003s3498 C. rubella v1.1
Defline:  (1 of 3) PTHR32077//PTHR32077:SF6 - FAMILY NOT NAMED // FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13-RELATED Genomic Order:  3498
Name:  ? Carub.0003s3498 Secondary Identifier:  ? PAC:39242933
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3498 0.5kb upstream 0.5kb upstream 1241 true scaffold_3: 14834270-14835510 Capsella rubella
Carub.0003s3498 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 14834270-14834769 Capsella rubella
Carub.0003s3498 0.5kb downstream 0.5kb downstream 1241 true scaffold_3: 14834770-14836010 Capsella rubella
Carub.0003s3498 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 14835511-14836010 Capsella rubella
Carub.0003s3498 1.0kb upstream 1.0kb upstream 1741 true scaffold_3: 14833770-14835510 Capsella rubella
Carub.0003s3498 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 14833770-14834769 Capsella rubella
Carub.0003s3498 1.0kb downstream 1.0kb downstream 1741 true scaffold_3: 14834770-14836510 Capsella rubella
Carub.0003s3498 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 14835511-14836510 Capsella rubella
Carub.0003s3498 2.0kb upstream 2.0kb upstream 2741 true scaffold_3: 14832770-14835510 Capsella rubella
Carub.0003s3498 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 14832770-14834769 Capsella rubella
Carub.0003s3498 2.0kb downstream 2.0kb downstream 2741 true scaffold_3: 14834770-14837510 Capsella rubella
Carub.0003s3498 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 14835511-14837510 Capsella rubella
Carub.0003s3498 5.0kb upstream 5.0kb upstream 5741 true scaffold_3: 14829770-14835510 Capsella rubella
Carub.0003s3498 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 14829770-14834769 Capsella rubella
Carub.0003s3498 5.0kb downstream 5.0kb downstream 5741 true scaffold_3: 14834770-14840510 Capsella rubella
Carub.0003s3498 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 14835511-14840510 Capsella rubella
Carub.0003s3498 10.0kb upstream 10.0kb upstream 10741 true scaffold_3: 14824770-14835510 Capsella rubella
Carub.0003s3498 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 14824770-14834769 Capsella rubella
Carub.0003s3498 10.0kb downstream 10.0kb downstream 10741 true scaffold_3: 14834770-14845510 Capsella rubella
Carub.0003s3498 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 14835511-14845510 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377766 5261 Brassicaceae View MSA
123801630 5264 Brassicales-Malvales View MSA
124298908 5266 SBM View MSA
124252572 5268 Malvidae View MSA
124064372 5270 Rosid View MSA
123738115 5271 Pentapetalae View MSA
122787076 5272 Eudicot View MSA
122047379 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain